RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	TDP1	P38319	544 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	FAD1	P38913	306 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	13.83	□□□□□ -0.2	not detected
SHR5	YOL110W	KEL2	P50090	882 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	ERP6	P53198	216 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	GPI1	P53306	609 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	ESF2	P53743	316 aa	Known RBP	13.83	□□□□□ -0.2
SHR5	YOL110W	YNL033W	P53964	284 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	YNL019C	P53975	284 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	SVL3	Q03088	825 aa	Known RBP	13.83	□□□□□ -0.2
SHR5	YOL110W	HFD1	Q04458	532 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	SSQ1	Q05931	657 aa	Predicted RBP	13.83	□□□□□ -0.2
SHR5	YOL110W	PDR8	Q06149	701 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	COS7	Q07788	383 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	YPR022C	Q12139	1133 aa		13.83	□□□□□ -0.2
SHR5	YOL110W	TY4B-P	A0A0B7P3V8	1104 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	RPS17A	P02407	136 aa	Known RBP	13.82	□□□□□ -0.2
SHR5	YOL110W	RPS17B	P14127	136 aa	Known RBP	13.82	□□□□□ -0.2
SHR5	YOL110W	SFA1	P32771	386 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	CAT2	P32796	670 aa	Known RBP	13.82	□□□□□ -0.2
SHR5	YOL110W	PRM10	P42946	383 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	RTS3	P53289	263 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	COS6	P53344	381 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	BNI4	P53858	892 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	ATP25	Q03153	612 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	RRN11	Q04712	507 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	YOL159C	Q08300	171 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	BMT6	Q12291	365 aa		13.82	□□□□□ -0.2
SHR5	YOL110W	YPR096C	O13587	100 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	HOG1	P32485	435 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	PEX6	P33760	1030 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	MRP8	P35719	219 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	VRG4	P40107	337 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	XYL2	Q07993	356 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	LEU9	Q12166	604 aa	Known RBP	13.81	□□□□□ -0.2
SHR5	YOL110W	YPR064W	Q12492	139 aa		13.81	□□□□□ -0.2
SHR5	YOL110W	PRO1	P32264	428 aa		13.8	□□□□□ -0.2
SHR5	YOL110W	ERG1	P32476	496 aa	Known RBP	13.8	□□□□□ -0.2
SHR5	YOL110W	DSS1	P39112	969 aa		13.8	□□□□□ -0.2
SHR5	YOL110W	PAC11	P40960	533 aa		13.8	□□□□□ -0.2
SHR5	YOL110W	NOP9	P47077	666 aa	Known RBP	13.8	□□□□□ -0.2
SHR5	YOL110W	FHN1	P53279	174 aa		13.8	□□□□□ -0.2
SHR5	YOL110W	ULA1	Q12059	462 aa		13.8	□□□□□ -0.2
SHR5	YOL110W	MLH3	Q12083	715 aa		13.8	□□□□□ -0.2
SHR5	YOL110W	UGA1	P17649	471 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	DPH5	P32469	300 aa	Predicted RBP	13.79	□□□□□ -0.2
SHR5	YOL110W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	13.79	□□□□□ -0.2	not detected
SHR5	YOL110W	ECM1	P39715	212 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	NAN1	Q02931	896 aa	Known RBP	13.79	□□□□□ -0.2
SHR5	YOL110W	HMO1	Q03973	246 aa	Known RBP	13.79	□□□□□ -0.2
SHR5	YOL110W	STP3	Q05937	343 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	BOP2	Q06150	570 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	YOL131W	Q08270	108 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	IRC13	Q08630	104 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	PUS9	Q12069	462 aa		13.79	□□□□□ -0.2
SHR5	YOL110W	PNO1	Q99216	274 aa	Known RBP	13.79	□□□□□ -0.2
SHR5	YOL110W	POL2	P21951	2222 aa	Known RBP	13.78	□□□□□ -0.2
SHR5	YOL110W	STE7	P06784	515 aa		13.78	□□□□□ -0.2
SHR5	YOL110W	SRB5	P32585	307 aa		13.78	□□□□□ -0.2
SHR5	YOL110W	SSO1	P32867	290 aa		13.78	□□□□□ -0.2
SHR5	YOL110W	PDX3	P38075	228 aa	Known RBP	13.78	□□□□□ -0.2
SHR5	YOL110W	NEO1	P40527	1151 aa		13.78	□□□□□ -0.2
SHR5	YOL110W	BCY1	P07278	416 aa	Known RBP	13.77	□□□□□ -0.21
SHR5	YOL110W	ALG7	P07286	448 aa		13.77	□□□□□ -0.21
SHR5	YOL110W	YIL001W	P40560	513 aa		13.77	□□□□□ -0.21
SHR5	YOL110W	PMT4	P46971	762 aa		13.77	□□□□□ -0.21
SHR5	YOL110W	RAD17	P48581	401 aa		13.77	□□□□□ -0.21
SHR5	YOL110W	YGR016W	P53209	190 aa		13.77	□□□□□ -0.21
SHR5	YOL110W	UGO1	Q03327	502 aa		13.77	□□□□□ -0.21
SHR5	YOL110W	DAP2	P18962	818 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	HOP1	P20050	605 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	SSH4	P32343	579 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	NUP2	P32499	720 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	MNN2	P38069	597 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	BNA4	P38169	460 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	MNL1	P38888	796 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	YHR218W	P38899	603 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	FAA2	P39518	744 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	MTW1	P39731	289 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	PSA1	P41940	361 aa	Known RBP	13.76	□□□□□ -0.21
SHR5	YOL110W	MDJ2	P42834	146 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	ROG1	P53118	685 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	APC4	Q04601	652 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	RRP45	Q05636	305 aa	Known RBP	13.76	□□□□□ -0.21
SHR5	YOL110W	PUN1	Q06991	263 aa		13.76	□□□□□ -0.21
SHR5	YOL110W	MGR1	P25573	417 aa		13.75	□□□□□ -0.21
SHR5	YOL110W	OMA1	P36163	345 aa		13.75	□□□□□ -0.21
SHR5	YOL110W	MNN9	P39107	395 aa	Known RBP	13.75	□□□□□ -0.21
SHR5	YOL110W	ECM10	P39987	644 aa		13.75	□□□□□ -0.21
SHR5	YOL110W	YJL043W	P47053	257 aa		13.75	□□□□□ -0.21
SHR5	YOL110W	DSL1	P53847	754 aa		13.75	□□□□□ -0.21
SHR5	YOL110W	MSC1	Q03104	513 aa		13.75	□□□□□ -0.21
SHR5	YOL110W	RPP1B	P10622	106 aa	Known RBP	13.74	□□□□□ -0.21
SHR5	YOL110W	SUI1	P32911	108 aa	Known RBP	13.74	□□□□□ -0.21
SHR5	YOL110W	FMP33	P46998	180 aa		13.74	□□□□□ -0.21
SHR5	YOL110W	YLR456W	Q06199	204 aa		13.74	□□□□□ -0.21
SHR5	YOL110W	MFG1	Q07684	458 aa		13.74	□□□□□ -0.21
SHR5	YOL110W	SKM1	Q12469	655 aa		13.74	□□□□□ -0.21
SHR5	YOL110W	CBP2	P03874	630 aa	Predicted RBP	13.73	□□□□□ -0.21
SHR5	YOL110W	CBS2	P14905	389 aa		13.73	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms