RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	YJL070C	P40361	888 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	UPF3	P48412	387 aa	Known RBP	4.17	□□□□□ -1.74
TRF5	YNL299W	MND1	P53102	219 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	ALG11	P53954	548 aa	Known RBP	4.17	□□□□□ -1.74
TRF5	YNL299W	VPS9	P54787	451 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	SNU56	Q03782	492 aa	Known RBP	4.17	□□□□□ -1.74
TRF5	YNL299W	URC2	Q04411	772 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	CDC123	Q05791	360 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	BRE4	Q07660	1125 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	TRM8	Q12009	286 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	SWM1	Q12379	170 aa		4.17	□□□□□ -1.74
TRF5	YNL299W	INH1	P01097	85 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	TPK3	P05986	398 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	TPK2	P06245	380 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	CDC31	P06704	161 aa	Known RBP	4.16	□□□□□ -1.74
TRF5	YNL299W	GUK1	P15454	187 aa	Known RBP	4.16	□□□□□ -1.74
TRF5	YNL299W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
TRF5	YNL299W	FAR1	P21268	830 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	CCA1	P21269	546 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	AMD2	P22580	549 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	VPS3	P23643	1011 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	CWH43	P25618	953 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	UBC8	P28263	218 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	YBL029W	P38201	376 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	IFA38	P38286	347 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	YHI9	P38765	294 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	PET100	P38958	111 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	YAT2	P40017	923 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	YJR061W	P40355	935 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	RTT101	P47050	842 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	MSE1	P48525	536 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	YDL183C	P48569	320 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	YGR127W	P53275	312 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	COG5	P53951	403 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	INA17	Q02888	182 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	ABZ2	Q03266	374 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	VID22	Q05934	901 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	DIS3	Q08162	1001 aa	Known RBP	4.16	□□□□□ -1.74
TRF5	YNL299W	DNL4	Q08387	944 aa	Predicted RBP	4.16	□□□□□ -1.74
TRF5	YNL299W	SLD7	Q08457	257 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	THP3	Q12049	470 aa	Known RBP	4.16	□□□□□ -1.74
TRF5	YNL299W	NSL1	Q12143	216 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	CTF3	Q12748	733 aa		4.16	□□□□□ -1.74
TRF5	YNL299W	HRP1	Q99383	534 aa	Known RBP	4.16	□□□□□ -1.74
TRF5	YNL299W	TPK1	P06244	397 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	NFT1	P0CE68	1218 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	ABF1	P14164	731 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	MET16	P18408	261 aa	Predicted RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	VPS33	P20795	691 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	CMK2	P22517	447 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	RSA4	P25382	515 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	RIM1	P32445	135 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	VPS21	P36017	210 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	YMC2	P38087	329 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	YBR241C	P38142	488 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	RFS1	P38234	210 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	PPE1	P38796	400 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	YHR182W	P38870	785 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	RRT5	P43607	289 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	BIR1	P47134	954 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	EFM3	P47163	339 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	IMD3	P50095	523 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	STB4	P50104	949 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	TEX1	P53851	422 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	ACS1	Q01574	713 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	RSC9	Q03124	581 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	CWC21	Q03375	135 aa	Known RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	PEX10	Q05568	337 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	SSQ1	Q05931	657 aa	Predicted RBP	4.15	□□□□□ -1.74
TRF5	YNL299W	GGA1	Q06336	557 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	CDD1	Q06549	142 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	AAD4	Q07747	329 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	PSR1	Q07800	427 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
TRF5	YNL299W	NRT1	Q08485	598 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	RSA1	Q08932	381 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	VPS54	Q12071	889 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	MED2	Q12124	431 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	UBR2	Q07963	1872 aa		4.15	□□□□□ -1.74
TRF5	YNL299W	CHS1	P08004	1131 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	ERG20	P08524	352 aa	Known RBP	4.15	□□□□□ -1.75
TRF5	YNL299W	EMC1	P25574	760 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	MEI5	P32489	222 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	GDH2	P33327	1092 aa	Known RBP	4.15	□□□□□ -1.75
TRF5	YNL299W	SLC1	P33333	303 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	CLG1	P35190	452 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	NOP4	P37838	685 aa	Known RBP	4.15	□□□□□ -1.75
TRF5	YNL299W	SLX1	P38324	304 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	AIM18	P38884	321 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	LYS9	P38999	446 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
TRF5	YNL299W	GIP4	P39732	760 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	FCY21	P40039	528 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	FAR7	P43592	221 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	DIE2	P50076	525 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	ALT2	P52892	507 aa		4.15	□□□□□ -1.75
TRF5	YNL299W	LSG1	P53145	640 aa	Known RBP	4.15	□□□□□ -1.75
TRF5	YNL299W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
TRF5	YNL299W	YNL095C	P53932	642 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms