RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A MDN1Q12019 4910 aaKnown RBP3.44□□□□□ -1.86
YSF3YNL138W-A PDR18P53756 1333 aa3.44□□□□□ -1.86
YSF3YNL138W-A SEC53P07283 254 aaKnown RBP3.43□□□□□ -1.86
YSF3YNL138W-A MRP13P12686 339 aa3.43□□□□□ -1.86
YSF3YNL138W-A EST1P17214 699 aaPredicted RBP3.43□□□□□ -1.86
YSF3YNL138W-A MAK31P23059 88 aa3.43□□□□□ -1.86
YSF3YNL138W-A SGV1P23293 657 aaKnown RBP3.43□□□□□ -1.86
YSF3YNL138W-A PPH22P23595 377 aa3.43□□□□□ -1.86
YSF3YNL138W-A BOS1P25385 244 aa3.43□□□□□ -1.86
YSF3YNL138W-A SSE2P32590 693 aaKnown RBP3.43□□□□□ -1.86
YSF3YNL138W-A TIF3P34167 436 aaKnown RBP3.43□□□□□ -1.86
YSF3YNL138W-A YBR144CP34215 104 aa3.43□□□□□ -1.86
YSF3YNL138W-A YKL100CP34248 587 aa3.43□□□□□ -1.86
YSF3YNL138W-A RPL32P38061 130 aaKnown RBP3.43□□□□□ -1.86
YSF3YNL138W-A LAG1P38703 411 aa3.43□□□□□ -1.86
YSF3YNL138W-A CCT6P39079 546 aa3.43□□□□□ -1.86
YSF3YNL138W-A FLC2P39719 783 aa3.43□□□□□ -1.86
YSF3YNL138W-A GUF1P46943 645 aa3.43□□□□□ -1.86
YSF3YNL138W-A APT1P49435 187 aaKnown RBP3.43□□□□□ -1.86
YSF3YNL138W-A YGR127WP53275 312 aa3.43□□□□□ -1.86
YSF3YNL138W-A DUG3P53871 357 aa3.43□□□□□ -1.86
YSF3YNL138W-A YPL014WQ02606 381 aa3.43□□□□□ -1.86
YSF3YNL138W-A MSS11Q03825 758 aa3.43□□□□□ -1.86
YSF3YNL138W-A RPC11Q04307 110 aaPredicted RBP3.43□□□□□ -1.86
YSF3YNL138W-A SSK1Q07084 712 aa3.43□□□□□ -1.86
YSF3YNL138W-A YPQ1Q12010 308 aa3.43□□□□□ -1.86
YSF3YNL138W-A NMD4Q12129 218 aa3.43□□□□□ -1.86
YSF3YNL138W-A DYN1P36022 4092 aa3.42□□□□□ -1.86
YSF3YNL138W-A SUI2P20459 304 aaKnown RBP3.42□□□□□ -1.86
YSF3YNL138W-A SNC1P31109 117 aa3.42□□□□□ -1.86
YSF3YNL138W-A ACH1P32316 526 aa3.42□□□□□ -1.86
YSF3YNL138W-A ERG1P32476 496 aaKnown RBP3.42□□□□□ -1.86
YSF3YNL138W-A SAC6P32599 642 aaKnown RBP3.42□□□□□ -1.86
YSF3YNL138W-A CSE1P33307 960 aa3.42□□□□□ -1.86
YSF3YNL138W-A SPC34P36131 295 aa3.42□□□□□ -1.86
YSF3YNL138W-A RIM2P38127 377 aa3.42□□□□□ -1.86
YSF3YNL138W-A TIF5P38431 405 aaKnown RBP3.42□□□□□ -1.86
YSF3YNL138W-A BAT1P38891 393 aaKnown RBP3.42□□□□□ -1.86
YSF3YNL138W-A PTI1P39927 425 aaPredicted RBP3.42□□□□□ -1.86
YSF3YNL138W-A SGN1P40561 250 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
YSF3YNL138W-A GPD2P41911 440 aaKnown RBP3.42□□□□□ -1.86
YSF3YNL138W-A MRX6P48564 524 aa3.42□□□□□ -1.86
YSF3YNL138W-A BUD32P53323 261 aa3.42□□□□□ -1.86
YSF3YNL138W-A IPI3P53877 555 aa3.42□□□□□ -1.86
YSF3YNL138W-A TDA7P53882 636 aaPredicted RBP3.42□□□□□ -1.86
YSF3YNL138W-A YMR160WQ03823 816 aa3.42□□□□□ -1.86
YSF3YNL138W-A YEH1Q07804 573 aa3.42□□□□□ -1.86
YSF3YNL138W-A FMP40Q08968 688 aaPredicted RBP3.42□□□□□ -1.86
YSF3YNL138W-A YPT6Q99260 215 aa3.42□□□□□ -1.86
YSF3YNL138W-A SIF2P38262 535 aa3.41□□□□□ -1.86
YSF3YNL138W-A OSH3P38713 996 aaKnown RBP3.41□□□□□ -1.86
YSF3YNL138W-A YER186CP40101 306 aa3.41□□□□□ -1.86
YSF3YNL138W-A SNG1P46950 547 aa3.41□□□□□ -1.86
YSF3YNL138W-A MNP1P53163 194 aaPredicted RBP3.41□□□□□ -1.86
YSF3YNL138W-A CUL3P53202 744 aa3.41□□□□□ -1.86
YSF3YNL138W-A NRM1P53718 249 aa3.41□□□□□ -1.86
YSF3YNL138W-A HER2Q03557 464 aa3.41□□□□□ -1.86
YSF3YNL138W-A YMR317WQ04893 1140 aa3.41□□□□□ -1.86
YSF3YNL138W-A SDH5Q08230 162 aa3.41□□□□□ -1.86
YSF3YNL138W-A ETT1Q08421 412 aaKnown RBP3.41□□□□□ -1.86
YSF3YNL138W-A ART10P18634 518 aaKnown RBP3.4□□□□□ -1.87
YSF3YNL138W-A FPR1P20081 114 aaKnown RBP3.4□□□□□ -1.87
YSF3YNL138W-A OLE1P21147 510 aaKnown RBP3.4□□□□□ -1.87
YSF3YNL138W-A PEP3P27801 918 aa3.4□□□□□ -1.87
YSF3YNL138W-A RML2P32611 393 aa3.4□□□□□ -1.87
YSF3YNL138W-A CYM1P32898 989 aa3.4□□□□□ -1.87
YSF3YNL138W-A YJL068CP40363 299 aa3.4□□□□□ -1.87
YSF3YNL138W-A YGL260WP53056 76 aa3.4□□□□□ -1.87
YSF3YNL138W-A YGR126WP53274 230 aa3.4□□□□□ -1.87
YSF3YNL138W-A YMR087WQ04299 284 aa3.4□□□□□ -1.87
YSF3YNL138W-A YDL057WQ07379 328 aa3.4□□□□□ -1.87
YSF3YNL138W-A SMC5Q08204 1093 aa3.4□□□□□ -1.87
YSF3YNL138W-A NCE102Q12207 173 aaRIP-Chip data3.4□□□□□ -1.87not detected
YSF3YNL138W-A RAD50P12753 1312 aa3.4□□□□□ -1.87
YSF3YNL138W-A CBS1P14066 229 aa3.39□□□□□ -1.87
YSF3YNL138W-A MTF1P14908 341 aaKnown RBP3.39□□□□□ -1.87
YSF3YNL138W-A MET8P15807 274 aa3.39□□□□□ -1.87
YSF3YNL138W-A TYR1P20049 452 aa3.39□□□□□ -1.87
YSF3YNL138W-A OPI1P21957 404 aa3.39□□□□□ -1.87
YSF3YNL138W-A RTT107P38850 1070 aa3.39□□□□□ -1.87
YSF3YNL138W-A CIN4P39110 191 aa3.39□□□□□ -1.87
YSF3YNL138W-A IMD4P50094 524 aaKnown RBP3.39□□□□□ -1.87
YSF3YNL138W-A DRN1P53255 507 aaKnown RBP3.39□□□□□ -1.87
YSF3YNL138W-A ALG11P53954 548 aaKnown RBP3.39□□□□□ -1.87
YSF3YNL138W-A SAM50P53969 484 aa3.39□□□□□ -1.87
YSF3YNL138W-A RHO4Q00246 291 aa3.39□□□□□ -1.87
YSF3YNL138W-A SHR3Q02774 210 aa3.39□□□□□ -1.87
YSF3YNL138W-A YLR456WQ06199 204 aa3.39□□□□□ -1.87
YSF3YNL138W-A RCN2Q12044 265 aa3.39□□□□□ -1.87
YSF3YNL138W-A TIP41Q12199 356 aa3.39□□□□□ -1.87
YSF3YNL138W-A PDA1P16387 420 aaKnown RBP3.38□□□□□ -1.87
YSF3YNL138W-A ELO2P25358 347 aa3.38□□□□□ -1.87
YSF3YNL138W-A SEF1P34228 1148 aa3.38□□□□□ -1.87
YSF3YNL138W-A YKL023WP36103 277 aaKnown RBP3.38□□□□□ -1.87
YSF3YNL138W-A FMP46P36141 133 aaKnown RBP3.38□□□□□ -1.87
YSF3YNL138W-A NOP4P37838 685 aaKnown RBP3.38□□□□□ -1.87
YSF3YNL138W-A SRO77P38163 1010 aa3.38□□□□□ -1.87
YSF3YNL138W-A MRX3P38172 270 aa3.38□□□□□ -1.87
YSF3YNL138W-A YBR225WP38321 900 aa3.38□□□□□ -1.87
YSF3YNL138W-A ALG5P40350 334 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms