RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	GID7	P25569	745 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	FUN19	P28003	413 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	PRP21	P32524	280 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
IOC4	YMR044W	MRP4	P32902	394 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	COY1	P34237	679 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	YBR139W	P38109	508 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	SPP381	P38282	291 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	CTM1	P38818	585 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	UBA4	P38820	440 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	BZZ1	P38822	633 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	KEL1	P38853	1164 aa	Known RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	PEX18	P38855	283 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	GPI16	P38875	610 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	STN1	P38960	494 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	YJR011C	P47086	261 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	BRO1	P48582	844 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	PYK2	P52489	506 aa	Known RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	YGL114W	P53134	725 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	LSB1	P53281	241 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	SMM1	P53720	384 aa	Known RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	MPP6	P53725	186 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	SNU56	Q03782	492 aa	Known RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	YMR310C	Q04867	317 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	ULA1	Q12059	462 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	SAC3	P46674	1301 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	HEM1	P09950	548 aa	Predicted RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	PEP5	P12868	1029 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	HNM1	P19807	563 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	YSC83	P32792	385 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	MSN2	P33748	704 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	SOR1	P35497	357 aa	Known RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	OAR1	P35731	278 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	RFC3	P38629	340 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	ERV46	P39727	415 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	GAT2	P40209	560 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	CDC1	P40986	491 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	YJL043W	P47053	257 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	LYS20	P48570	428 aa	Known RBP	4.12	□□□□□ -1.75
IOC4	YMR044W	ORC5	P50874	479 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	YNL146W	P53906	100 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	ATC1	Q04005	294 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	HSP31	Q04432	237 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	PDR8	Q06149	701 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	SOR2	Q07786	357 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	PEX27	Q08580	376 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	RUP1	Q12242	671 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	YOR012W	Q12351	137 aa		4.12	□□□□□ -1.75
IOC4	YMR044W	TDH1	P00360	332 aa	Known RBP	4.11	□□□□□ -1.75
IOC4	YMR044W	RAD52	P06778	471 aa	Known RBP	4.11	□□□□□ -1.75
IOC4	YMR044W	CDC21	P06785	304 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	GPA1	P08539	472 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	SEC63	P14906	663 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	UGA1	P17649	471 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	TYR1	P20049	452 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	NUP1	P20676	1076 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	MAK32	P23060	363 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	PSO2	P30620	661 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	COT1	P32798	439 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	RPC34	P32910	317 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	KKQ8	P36004	724 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	YKL070W	P36087	169 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	QDR3	P38227	689 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	SWC5	P38326	303 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	ARP1	P38696	384 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	IRC24	P40580	263 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	PAC11	P40960	533 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	SAS2	P40963	338 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	IAH1	P41734	238 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	IMD3	P50095	523 aa	Known RBP	4.11	□□□□□ -1.75
IOC4	YMR044W	YIF1	P53845	314 aa	Known RBP	4.11	□□□□□ -1.75
IOC4	YMR044W	KTR5	P53966	522 aa	Predicted RBP	4.11	□□□□□ -1.75
IOC4	YMR044W	YPR078C	Q06813	372 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	MCH4	Q08268	501 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	YOR365C	Q08844	703 aa		4.11	□□□□□ -1.75
IOC4	YMR044W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
IOC4	YMR044W	MAS1	P10507	462 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	RPB8	P20436	146 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	SAR1	P20606	190 aa	Known RBP	4.1	□□□□□ -1.75
IOC4	YMR044W	CYS4	P32582	507 aa	Known RBP	4.1	□□□□□ -1.75
IOC4	YMR044W	OCT1	P35999	772 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	STV1	P37296	890 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	RRP4	P38792	359 aa	Known RBP	4.1	□□□□□ -1.75
IOC4	YMR044W	ALP1	P38971	573 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	YMR124W	P39523	943 aa	Known RBP	4.1	□□□□□ -1.75
IOC4	YMR044W	YEL020C	P39994	560 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	SYG1	P40528	902 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	LOC1	P43586	204 aa	Predicted RBP	4.1	□□□□□ -1.75
IOC4	YMR044W	PHO86	P46956	311 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	VOA1	P53262	265 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	BUD32	P53323	261 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	DSL1	P53847	754 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	CAB5	Q03941	241 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	CSI1	Q04368	295 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	STE23	Q06010	1027 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	ARR1	Q06596	294 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	GLE1	Q12315	538 aa		4.1	□□□□□ -1.75
IOC4	YMR044W	YPR089W	O13585	888 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	MES1	P00958	751 aa	Known RBP	4.09	□□□□□ -1.75
IOC4	YMR044W	UNG1	P12887	359 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms