RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C VPS34P22543 875 aa4.58□□□□□ -1.68
CCS1YMR038C RFA2P26754 273 aaKnown RBP4.58□□□□□ -1.68
CCS1YMR038C AEP1P32493 518 aa4.58□□□□□ -1.68
CCS1YMR038C CDC5P32562 705 aa4.58□□□□□ -1.68
CCS1YMR038C ARA1P38115 344 aa4.58□□□□□ -1.68
CCS1YMR038C IML3P38265 245 aa4.58□□□□□ -1.68
CCS1YMR038C SDH8P38345 138 aa4.58□□□□□ -1.68
CCS1YMR038C STN1P38960 494 aa4.58□□□□□ -1.68
CCS1YMR038C CCT6P39079 546 aa4.58□□□□□ -1.68
CCS1YMR038C TFG2P41896 400 aaPredicted RBP4.58□□□□□ -1.68
CCS1YMR038C SPG5P42933 373 aa4.58□□□□□ -1.68
CCS1YMR038C YGL108CP53139 140 aa4.58□□□□□ -1.68
CCS1YMR038C IMO32P53219 342 aa4.58□□□□□ -1.68
CCS1YMR038C YNL092WP53934 400 aa4.58□□□□□ -1.68
CCS1YMR038C CDC14Q00684 551 aa4.58□□□□□ -1.68
CCS1YMR038C TRS31Q03337 283 aa4.58□□□□□ -1.68
CCS1YMR038C OPY2Q06810 360 aa4.58□□□□□ -1.68
CCS1YMR038C AAD15Q08361 143 aa4.58□□□□□ -1.68
CCS1YMR038C RPL7BQ12213 244 aaKnown RBP4.58□□□□□ -1.68
CCS1YMR038C AI5_ALPHAQ9ZZX1 630 aa4.58□□□□□ -1.68
CCS1YMR038C SCL1P21243 252 aaKnown RBP4.57□□□□□ -1.68
CCS1YMR038C EPT1P22140 391 aa4.57□□□□□ -1.68
CCS1YMR038C AAD3P25612 363 aa4.57□□□□□ -1.68
CCS1YMR038C PRE2P30656 287 aaKnown RBP4.57□□□□□ -1.68
CCS1YMR038C MRPL9P31334 269 aa4.57□□□□□ -1.68
CCS1YMR038C SPS19P32573 292 aaKnown RBP4.57□□□□□ -1.68
CCS1YMR038C YBL055CP34220 418 aaPredicted RBP4.57□□□□□ -1.68
CCS1YMR038C BLI1P35727 113 aa4.57□□□□□ -1.68
CCS1YMR038C DED81P38707 554 aaKnown RBP4.57□□□□□ -1.68
CCS1YMR038C CYC2P38909 366 aa4.57□□□□□ -1.68
CCS1YMR038C RPH1P39956 796 aa4.57□□□□□ -1.68
CCS1YMR038C YAT2P40017 923 aa4.57□□□□□ -1.68
CCS1YMR038C QRI7P43122 407 aa4.57□□□□□ -1.68
CCS1YMR038C YFL015CP43578 164 aa4.57□□□□□ -1.68
CCS1YMR038C MAD3P47074 515 aa4.57□□□□□ -1.68
CCS1YMR038C MOT3P54785 490 aaKnown RBP4.57□□□□□ -1.68
CCS1YMR038C NGL3Q03210 505 aa4.57□□□□□ -1.68
CCS1YMR038C MLC2Q06580 163 aa4.57□□□□□ -1.68
CCS1YMR038C OSW1Q08692 278 aa4.57□□□□□ -1.68
CCS1YMR038C NEW1Q08972 1196 aaKnown RBP4.57□□□□□ -1.68
CCS1YMR038C PFA4Q12006 378 aa4.57□□□□□ -1.68
CCS1YMR038C APL4Q12028 832 aa4.57□□□□□ -1.68
CCS1YMR038C SMF3Q12078 473 aaPredicted RBP4.57□□□□□ -1.68
CCS1YMR038C AAC1P04710 309 aa4.56□□□□□ -1.68
CCS1YMR038C BCY1P07278 416 aaKnown RBP4.56□□□□□ -1.68
CCS1YMR038C MSS18P08593 268 aa4.56□□□□□ -1.68
CCS1YMR038C ILS1P09436 1072 aaKnown RBP4.56□□□□□ -1.68
CCS1YMR038C APA1P16550 321 aaKnown RBP4.56□□□□□ -1.68
CCS1YMR038C SEC62P21825 274 aa4.56□□□□□ -1.68
CCS1YMR038C RRP43P25359 394 aaPredicted RBP4.56□□□□□ -1.68
CCS1YMR038C MRPL10P36520 322 aa4.56□□□□□ -1.68
CCS1YMR038C RKM3P38222 552 aa4.56□□□□□ -1.68
CCS1YMR038C DIA4P38705 446 aaPredicted RBP4.56□□□□□ -1.68
CCS1YMR038C RTS3P53289 263 aa4.56□□□□□ -1.68
CCS1YMR038C NUP100Q02629 959 aa4.56□□□□□ -1.68
CCS1YMR038C LGE1Q02796 332 aaKnown RBP4.56□□□□□ -1.68
CCS1YMR038C ARX1Q03862 593 aaKnown RBP4.56□□□□□ -1.68
CCS1YMR038C CIA1Q05583 330 aa4.56□□□□□ -1.68
CCS1YMR038C PLB3Q08108 686 aa4.56□□□□□ -1.68
CCS1YMR038C NRT1Q08485 598 aa4.56□□□□□ -1.68
CCS1YMR038C YLL056CQ12177 298 aa4.56□□□□□ -1.68
CCS1YMR038C YDR018CQ12185 396 aa4.56□□□□□ -1.68
CCS1YMR038C PTP2P29461 750 aa4.55□□□□□ -1.68
CCS1YMR038C CDC13P32797 924 aaKnown RBP4.55□□□□□ -1.68
CCS1YMR038C RAD5P32849 1169 aaPredicted RBP4.55□□□□□ -1.68
CCS1YMR038C SEF1P34228 1148 aa4.55□□□□□ -1.68
CCS1YMR038C GND1P38720 489 aaKnown RBP4.55□□□□□ -1.68
CCS1YMR038C SPC72P39723 622 aa4.55□□□□□ -1.68
CCS1YMR038C RGI2P40188 164 aa4.55□□□□□ -1.68
CCS1YMR038C HIS6P40545 261 aa4.55□□□□□ -1.68
CCS1YMR038C SSU1P41930 458 aa4.55□□□□□ -1.68
CCS1YMR038C IDS2P46958 469 aa4.55□□□□□ -1.68
CCS1YMR038C YML6P51998 286 aa4.55□□□□□ -1.68
CCS1YMR038C PEX25Q02969 394 aa4.55□□□□□ -1.68
CCS1YMR038C YMR160WQ03823 816 aa4.55□□□□□ -1.68
CCS1YMR038C SOV1Q04748 898 aa4.55□□□□□ -1.68
CCS1YMR038C RCO1Q04779 684 aa4.55□□□□□ -1.68
CCS1YMR038C LDB17Q12342 491 aa4.55□□□□□ -1.68
CCS1YMR038C RRP12Q12754 1228 aaKnown RBP4.55□□□□□ -1.68
CCS1YMR038C YLR462WO13556 202 aa4.54□□□□□ -1.68
CCS1YMR038C PMS1P14242 873 aa4.54□□□□□ -1.68
CCS1YMR038C YSP3P25036 478 aa4.54□□□□□ -1.68
CCS1YMR038C RAD57P25301 460 aa4.54□□□□□ -1.68
CCS1YMR038C YCR006CP25350 157 aa4.54□□□□□ -1.68
CCS1YMR038C YCR061WP25639 631 aa4.54□□□□□ -1.68
CCS1YMR038C MSH1P25846 959 aa4.54□□□□□ -1.68
CCS1YMR038C IMP3P32899 183 aaPredicted RBP4.54□□□□□ -1.68
CCS1YMR038C NTR2P36118 322 aaPredicted RBP4.54□□□□□ -1.68
CCS1YMR038C DBP8P38719 431 aa4.54□□□□□ -1.68
CCS1YMR038C YHL049CP38722 271 aa4.54□□□□□ -1.68
CCS1YMR038C LYS1P38998 373 aaRIP-Chip data4.54□□□□□ -1.68not detected
CCS1YMR038C LCP5P40079 357 aaPredicted RBP4.54□□□□□ -1.68
CCS1YMR038C LSM5P40089 93 aaKnown RBP4.54□□□□□ -1.68
CCS1YMR038C YFL064CP43540 174 aa4.54□□□□□ -1.68
CCS1YMR038C TRM9P49957 279 aa4.54□□□□□ -1.68
CCS1YMR038C KAP114P53067 1004 aa4.54□□□□□ -1.68
CCS1YMR038C ARE2P53629 642 aaKnown RBP4.54□□□□□ -1.68
CCS1YMR038C YLR030WQ07967 263 aa4.54□□□□□ -1.68
CCS1YMR038C DAS2Q12084 232 aa4.54□□□□□ -1.68
CCS1YMR038C YBL111CQ3E7Y5 667 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms