RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	KAP104	P38217	918 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	MSG5	P38590	489 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	RGI2	P40188	164 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	YGR168C	P53293	376 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MRP51	Q02950	344 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	ARG7	Q04728	441 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MDM30	Q05930	598 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	IZH3	Q07959	543 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	DSE3	Q08729	430 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	POM33	Q12164	279 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	PKH2	Q12236	1081 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	AHA1	Q12449	350 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	GLT1	Q12680	2145 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	HAP2	P06774	265 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	NFT1	P0CE68	1218 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MTF1	P14908	341 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	KIN82	P25341	720 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	YIH1	P25637	258 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	KRE6	P32486	720 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	TMT1	P32643	299 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MGM101	P32787	269 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	YSC83	P32792	385 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	TAF14	P35189	244 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	LHS1	P36016	881 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	OTU2	P38747	307 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	FSH1	P38777	243 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	HIT1	P46973	164 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MND1	P53102	219 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	RMD9	P53140	646 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	ZPR1	P53303	486 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	SMM1	P53720	384 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	TAF12	Q03761	539 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	BNA5	Q05979	453 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	PEX27	Q08580	376 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	NBP2	Q12163	236 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	YLR422W	Q06409	1932 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	YMR085W	P0CF18	432 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	WHI2	P12611	486 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	ABF1	P14164	731 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	RPB4	P20433	221 aa	Predicted RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	PWP1	P21304	576 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	ELO2	P25358	347 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	RRP43	P25359	394 aa	Predicted RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	RHB1	P25378	209 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	TPO5	P36029	618 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	GLG1	P36143	616 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	VID24	P38263	362 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	IML3	P38265	245 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	PEF1	P53238	335 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	YGR151C	P53287	111 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MTG1	Q03151	367 aa	Predicted RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	EKI1	Q03764	534 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MSS11	Q03825	758 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	MYO5	Q04439	1219 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	YLR415C	O13578	112 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	SEM1	O94742	89 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YLL053C	P0CD98	152 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	AMD1	P15274	810 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	BUD5	P25300	642 aa	Predicted RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	AIM3	P38266	947 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	MET18	P40469	1032 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	NMD5	P46970	1048 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YJL132W	P47014	750 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YPT11	P48559	417 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	SHE4	P51534	789 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	PRM1	P53835	661 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YPL080C	Q02826	108 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YDR387C	Q04162	555 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	AIM33	Q04516	312 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	ASA1	Q06822	443 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YEH1	Q07804	573 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	GEP3	Q08622	556 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	RPL18A	P0CX49	186 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	RPL18B	P0CX50	186 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	RPS16A	P0CX51	143 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	RPS16B	P0CX52	143 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	MATALPHA2	P0CY08	210 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	HMLALPHA2	P0CY09	210 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	NUP1	P20676	1076 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	RNR3	P21672	869 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	SOR1	P35497	357 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	NOP4	P37838	685 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	RPL32	P38061	130 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	YBL028C	P38202	106 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	VHC1	P38329	1120 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	MSR1	P38714	643 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	MKT1	P40850	830 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	CHS6	P40955	746 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	ECL1	P48235	211 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	MAL12	P53341	584 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	TDA7	P53882	636 aa	Predicted RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	CAB5	Q03941	241 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	SOR2	Q07786	357 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	CMS1	Q07897	291 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	RPS10A	Q08745	105 aa	Predicted RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	YLR049C	Q12110	428 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	FRE7	Q12333	620 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	TDH1	P00360	332 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	PPR1	P07272	904 aa	Predicted RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	REV1	P12689	985 aa		1.24	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms