RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C MHR1Q06630 226 aa3.74□□□□□ -1.81
RPF2YKR081C TMC1Q08422 150 aaPredicted RBP3.74□□□□□ -1.81
RPF2YKR081C TIP1P27654 210 aaPredicted RBP3.73□□□□□ -1.81
RPF2YKR081C ECM25P32525 599 aa3.73□□□□□ -1.81
RPF2YKR081C SPR1P32603 445 aa3.73□□□□□ -1.81
RPF2YKR081C OTU2P38747 307 aaKnown RBP3.73□□□□□ -1.81
RPF2YKR081C CCT2P39076 527 aaKnown RBP3.73□□□□□ -1.81
RPF2YKR081C PRM5P40476 318 aa3.73□□□□□ -1.81
RPF2YKR081C LAM5P43560 674 aa3.73□□□□□ -1.81
RPF2YKR081C VTC2P43585 828 aa3.73□□□□□ -1.81
RPF2YKR081C ECM27P47144 725 aa3.73□□□□□ -1.81
RPF2YKR081C MDG1P53885 366 aa3.73□□□□□ -1.81
RPF2YKR081C HER2Q03557 464 aa3.73□□□□□ -1.81
RPF2YKR081C YDR387CQ04162 555 aa3.73□□□□□ -1.81
RPF2YKR081C BSC6Q08280 497 aa3.73□□□□□ -1.81
RPF2YKR081C TIM18Q08749 192 aa3.73□□□□□ -1.81
RPF2YKR081C PKH2Q12236 1081 aaKnown RBP3.73□□□□□ -1.81
RPF2YKR081C GRX6Q12438 231 aa3.73□□□□□ -1.81
RPF2YKR081C YLR278CQ05854 1341 aa3.72□□□□□ -1.81
RPF2YKR081C GPH1P06738 902 aaKnown RBP3.72□□□□□ -1.81
RPF2YKR081C PET123P17558 318 aa3.72□□□□□ -1.81
RPF2YKR081C HXT1P32465 570 aa3.72□□□□□ -1.81
RPF2YKR081C PRP21P32524 280 aaPredicted RBP3.72□□□□□ -1.81
RPF2YKR081C PIM1P36775 1133 aa3.72□□□□□ -1.81
RPF2YKR081C NCA3P46955 337 aa3.72□□□□□ -1.81
RPF2YKR081C KTR5P53966 522 aaPredicted RBP3.72□□□□□ -1.81
RPF2YKR081C HRI1Q05905 244 aaKnown RBP3.72□□□□□ -1.81
RPF2YKR081C HIS4P00815 799 aaKnown RBP3.71□□□□□ -1.82
RPF2YKR081C DAL2P25335 343 aa3.71□□□□□ -1.82
RPF2YKR081C CDC60P26637 1090 aaKnown RBP3.71□□□□□ -1.82
RPF2YKR081C APE2P32454 952 aaKnown RBP3.71□□□□□ -1.82
RPF2YKR081C SMF1P38925 575 aa3.71□□□□□ -1.82
RPF2YKR081C IRC6P43615 237 aa3.71□□□□□ -1.82
RPF2YKR081C YMR181CQ03231 154 aa3.71□□□□□ -1.82
RPF2YKR081C YPR022CQ12139 1133 aa3.71□□□□□ -1.82
RPF2YKR081C ADH2P00331 348 aaKnown RBP3.7□□□□□ -1.82
RPF2YKR081C RVS161P25343 265 aaKnown RBP3.7□□□□□ -1.82
RPF2YKR081C MTC6P38849 526 aa3.7□□□□□ -1.82
RPF2YKR081C YLR152CP54072 576 aa3.7□□□□□ -1.82
RPF2YKR081C VTA1Q06263 330 aa3.7□□□□□ -1.82
RPF2YKR081C RBD2Q12270 262 aa3.7□□□□□ -1.82
RPF2YKR081C CKA1P15790 372 aa3.69□□□□□ -1.82
RPF2YKR081C RPI1P23250 407 aaKnown RBP3.69□□□□□ -1.82
RPF2YKR081C HXT3P32466 567 aaKnown RBP3.69□□□□□ -1.82
RPF2YKR081C VHC1P38329 1120 aa3.69□□□□□ -1.82
RPF2YKR081C PAN6P40459 309 aa3.69□□□□□ -1.82
RPF2YKR081C YNR048WP53740 393 aa3.69□□□□□ -1.82
RPF2YKR081C HXT11P54862 567 aa3.69□□□□□ -1.82
RPF2YKR081C PPM1Q04081 328 aa3.69□□□□□ -1.82
RPF2YKR081C SGT1Q08446 395 aa3.69□□□□□ -1.82
RPF2YKR081C MET17P06106 444 aa3.68□□□□□ -1.82
RPF2YKR081C RIP1P08067 215 aa3.68□□□□□ -1.82
RPF2YKR081C PPH22P23595 377 aa3.68□□□□□ -1.82
RPF2YKR081C ROX1P25042 368 aa3.68□□□□□ -1.82
RPF2YKR081C YHR054CP38780 354 aa3.68□□□□□ -1.82
RPF2YKR081C TIS11P47977 285 aa3.68□□□□□ -1.82
RPF2YKR081C FRE4P53746 719 aa3.68□□□□□ -1.82
RPF2YKR081C YIF1P53845 314 aaKnown RBP3.68□□□□□ -1.82
RPF2YKR081C ARG4P04076 463 aaPredicted RBP3.67□□□□□ -1.82
RPF2YKR081C TOP1P04786 769 aa3.67□□□□□ -1.82
RPF2YKR081C RPL3P14126 387 aaKnown RBP3.67□□□□□ -1.82
RPF2YKR081C ITR1P30605 584 aa3.67□□□□□ -1.82
RPF2YKR081C MNS1P32906 549 aa3.67□□□□□ -1.82
RPF2YKR081C LYS1P38998 373 aaRIP-Chip data3.67□□□□□ -1.82not detected
RPF2YKR081C ESL1P40456 1118 aa3.67□□□□□ -1.82
RPF2YKR081C MNP1P53163 194 aaPredicted RBP3.67□□□□□ -1.82
RPF2YKR081C YMR027WQ04371 470 aa3.67□□□□□ -1.82
RPF2YKR081C TEF1P02994 458 aaKnown RBP3.66□□□□□ -1.82
RPF2YKR081C MSG5P38590 489 aa3.66□□□□□ -1.82
RPF2YKR081C SAS2P40963 338 aa3.66□□□□□ -1.82
RPF2YKR081C FMS1P50264 508 aa3.66□□□□□ -1.82
RPF2YKR081C CWC25P53854 179 aaKnown RBP3.66□□□□□ -1.82
RPF2YKR081C MRPL19P53875 158 aa3.66□□□□□ -1.82
RPF2YKR081C PEX25Q02969 394 aa3.66□□□□□ -1.82
RPF2YKR081C BUD21Q08492 214 aaPredicted RBP3.66□□□□□ -1.82
RPF2YKR081C SNX3Q08826 162 aaKnown RBP3.66□□□□□ -1.82
RPF2YKR081C SEC63P14906 663 aa3.65□□□□□ -1.83
RPF2YKR081C SLY1P22213 666 aa3.65□□□□□ -1.83
RPF2YKR081C PRS1P32895 427 aaKnown RBP3.65□□□□□ -1.83
RPF2YKR081C HCS1P34243 683 aa3.65□□□□□ -1.83
RPF2YKR081C KKQ8P36004 724 aa3.65□□□□□ -1.83
RPF2YKR081C ARA1P38115 344 aa3.65□□□□□ -1.83
RPF2YKR081C YBR137WP38276 179 aa3.65□□□□□ -1.83
RPF2YKR081C DLD2P46681 530 aaKnown RBP3.65□□□□□ -1.83
RPF2YKR081C YJR011CP47086 261 aaPredicted RBP3.65□□□□□ -1.83
RPF2YKR081C SHY1P53266 389 aa3.65□□□□□ -1.83
RPF2YKR081C MTM1P53320 366 aa3.65□□□□□ -1.83
RPF2YKR081C RSN1Q03516 953 aa3.65□□□□□ -1.83
RPF2YKR081C SYF1Q04048 859 aaPredicted RBP3.65□□□□□ -1.83
RPF2YKR081C FDH1Q08911 376 aa3.65□□□□□ -1.83
RPF2YKR081C WTM1Q12363 437 aaKnown RBP3.65□□□□□ -1.83
RPF2YKR081C SOD1P00445 154 aaKnown RBP3.64□□□□□ -1.83
RPF2YKR081C TRP1P00912 224 aa3.64□□□□□ -1.83
RPF2YKR081C RPS8AP0CX39 200 aaKnown RBP3.64□□□□□ -1.83
RPF2YKR081C RPS8BP0CX40 200 aaKnown RBP3.64□□□□□ -1.83
RPF2YKR081C CLC1P17891 233 aa3.64□□□□□ -1.83
RPF2YKR081C LSB5P25369 354 aa3.64□□□□□ -1.83
RPF2YKR081C MUD1P32605 298 aaKnown RBP3.64□□□□□ -1.83
RPF2YKR081C RPA49Q01080 415 aaPredicted RBP3.64□□□□□ -1.83
RPF2YKR081C TSR2Q06672 205 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms