RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	CDC21	P06785	304 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	MAS1	P10507	462 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	YPK1	P12688	680 aa	Known RBP	4.84	□□□□□ -1.63
SIS2	YKR072C	OSM1	P21375	501 aa	Known RBP	4.84	□□□□□ -1.63
SIS2	YKR072C	DAL81	P21657	970 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SIS2	YKR072C	ELF1	P36053	145 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	PLB1	P39105	664 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	OPT1	P40897	799 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	YFR020W	P43600	232 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	YGR117C	P53270	476 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	YMR187C	Q03236	431 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	PDR8	Q06149	701 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	MRPL35	Q06678	367 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	HMI1	Q12039	706 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	BTS1	Q12051	335 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SIS2	YKR072C	SCC2	Q04002	1493 aa		4.84	□□□□□ -1.64
SIS2	YKR072C	PMA1	P05030	918 aa	Known RBP	4.83	□□□□□ -1.64
SIS2	YKR072C	RIP1	P08067	215 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	AMD2	P22580	549 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	HXT2	P23585	541 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	MGR1	P25573	417 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	YUR1	P26725	428 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	ICL1	P28240	557 aa	Predicted RBP	4.83	□□□□□ -1.64
SIS2	YKR072C	DUG2	P38149	878 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	TSC10	P38342	320 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	SPC97	P38863	823 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	ALP1	P38971	573 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	ICP55	P40051	511 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	LAS21	P40367	830 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	TOS3	P43637	560 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	BIO3	P50277	480 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	YNL260C	P53846	198 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	UBP16	Q02863	499 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	TGS1	Q12052	315 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	YOS9	Q99220	542 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	RVS161	P25343	265 aa	Known RBP	4.83	□□□□□ -1.64
SIS2	YKR072C	FUB1	P25659	250 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	RAD23	P32628	398 aa	Known RBP	4.83	□□□□□ -1.64
SIS2	YKR072C	RPC25	P35718	212 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	GPI16	P38875	610 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	MBB1	P39534	108 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	ERG26	P53199	349 aa	Known RBP	4.83	□□□□□ -1.64
SIS2	YKR072C	ESBP6	P53918	673 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	RPS15	Q01855	142 aa	Known RBP	4.83	□□□□□ -1.64
SIS2	YKR072C	MUK1	Q02866	612 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	NSE1	Q07913	336 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	PEX27	Q08580	376 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	RDR1	Q08904	546 aa		4.83	□□□□□ -1.64
SIS2	YKR072C	YPK9	Q12697	1472 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	RAV1	P47104	1357 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	CHO2	P05374	869 aa	Known RBP	4.82	□□□□□ -1.64
SIS2	YKR072C	COR1	P07256	457 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	SGV1	P23293	657 aa	Known RBP	4.82	□□□□□ -1.64
SIS2	YKR072C	RHB1	P25378	209 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	YPS1	P32329	569 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SIS2	YKR072C	BUD2	P33314	1104 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	ECT1	P33412	323 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	TRM2	P33753	639 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	YKL071W	P36086	256 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	SPP381	P38282	291 aa	Predicted RBP	4.82	□□□□□ -1.64
SIS2	YKR072C	STN1	P38960	494 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	CDC40	P40968	455 aa	Predicted RBP	4.82	□□□□□ -1.64
SIS2	YKR072C	TAX4	P47030	604 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	DRN1	P53255	507 aa	Known RBP	4.82	□□□□□ -1.64
SIS2	YKR072C	BUD17	P53727	317 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	MSC1	Q03104	513 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	ROT1	Q03691	256 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	BNA7	Q04066	261 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	NOP12	Q08208	459 aa	Known RBP	4.82	□□□□□ -1.64
SIS2	YKR072C	RUP1	Q12242	671 aa		4.82	□□□□□ -1.64
SIS2	YKR072C	COX3	P00420	269 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	SCEI	P03882	235 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	MSF1	P08425	469 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	NFT1	P0CE68	1218 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	ABF1	P14164	731 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	MSB1	P21339	1137 aa	Known RBP	4.81	□□□□□ -1.64
SIS2	YKR072C	DAL2	P25335	343 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	SIN4	P32259	974 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	FRE1	P32791	686 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	EFM2	P38347	419 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	YMR262W	P38430	313 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	DBP8	P38719	431 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SIS2	YKR072C	PRP39	P39682	629 aa	Known RBP	4.81	□□□□□ -1.64
SIS2	YKR072C	PAC11	P40960	533 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	SPG5	P42933	373 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	SLG1	P54867	378 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	YML053C	Q04978	212 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	SHS1	Q07657	551 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	BSC6	Q08280	497 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	PUS9	Q12069	462 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	YDR262W	Q12331	272 aa		4.81	□□□□□ -1.64
SIS2	YKR072C	PAA1	Q12447	191 aa	Known RBP	4.81	□□□□□ -1.64
SIS2	YKR072C	ADE4	P04046	510 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	RAP1	P11938	827 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	YSC83	P32792	385 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	EMP70	P32802	667 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms