RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W STE14P32584 239 aa2.24□□□□□ -2.05
NUP100YKL068W IMP3P32899 183 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W SAF1P38352 637 aa2.24□□□□□ -2.05
NUP100YKL068W MSR1P38714 643 aa2.24□□□□□ -2.05
NUP100YKL068W YHR182WP38870 785 aa2.24□□□□□ -2.05
NUP100YKL068W YER085CP40058 173 aa2.24□□□□□ -2.05
NUP100YKL068W UTP18P40362 594 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W COS5P47187 383 aa2.24□□□□□ -2.05
NUP100YKL068W COQ6P53318 479 aa2.24□□□□□ -2.05
NUP100YKL068W INA17Q02888 182 aa2.24□□□□□ -2.05
NUP100YKL068W RLI1Q03195 608 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W ERV41Q04651 352 aa2.24□□□□□ -2.05
NUP100YKL068W COS7Q07788 383 aa2.24□□□□□ -2.05
NUP100YKL068W BSC6Q08280 497 aa2.24□□□□□ -2.05
NUP100YKL068W NRT1Q08485 598 aa2.24□□□□□ -2.05
NUP100YKL068W YDL007C-AQ2V2Q0 85 aa2.24□□□□□ -2.05
NUP100YKL068W CAR1P00812 333 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W RAD23P32628 398 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W YBR144CP34215 104 aa2.24□□□□□ -2.05
NUP100YKL068W TAE1P38340 232 aa2.24□□□□□ -2.05
NUP100YKL068W SIC1P38634 284 aa2.24□□□□□ -2.05
NUP100YKL068W IMD2P38697 523 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W UBP5P39944 805 aa2.24□□□□□ -2.05
NUP100YKL068W VHS2P40463 436 aa2.24□□□□□ -2.05
NUP100YKL068W CSM2P40465 213 aa2.24□□□□□ -2.05
NUP100YKL068W YRB2P40517 327 aa2.24□□□□□ -2.05
NUP100YKL068W URM1P40554 99 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W RFX1P48743 811 aa2.24□□□□□ -2.05
NUP100YKL068W DIA3P52290 468 aa2.24□□□□□ -2.05
NUP100YKL068W MTL1P53214 551 aa2.24□□□□□ -2.05
NUP100YKL068W RET3P53600 189 aa2.24□□□□□ -2.05
NUP100YKL068W RTC4P53850 401 aa2.24□□□□□ -2.05
NUP100YKL068W TEX1P53851 422 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W KTR5P53966 522 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W KTR6P54070 446 aa2.24□□□□□ -2.05
NUP100YKL068W SLU7Q02775 382 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W STD1Q02794 444 aa2.24□□□□□ -2.05
NUP100YKL068W RRN11Q04712 507 aa2.24□□□□□ -2.05
NUP100YKL068W GTO3Q04806 366 aa2.24□□□□□ -2.05
NUP100YKL068W ATG23Q06671 453 aa2.24□□□□□ -2.05
NUP100YKL068W YFT2Q06676 274 aa2.24□□□□□ -2.05
NUP100YKL068W MRH1Q12117 320 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W FMP16Q12497 93 aa2.24□□□□□ -2.05
NUP100YKL068W CDC21P06785 304 aa2.23□□□□□ -2.05
NUP100YKL068W CDC6P09119 513 aa2.23□□□□□ -2.05
NUP100YKL068W YSP3P25036 478 aa2.23□□□□□ -2.05
NUP100YKL068W FEN2P25621 512 aaKnown RBP2.23□□□□□ -2.05
NUP100YKL068W GSH1P32477 678 aa2.23□□□□□ -2.05
NUP100YKL068W YKL023WP36103 277 aaKnown RBP2.23□□□□□ -2.05
NUP100YKL068W ARA1P38115 344 aa2.23□□□□□ -2.05
NUP100YKL068W PPS1P38148 807 aa2.23□□□□□ -2.05
NUP100YKL068W SPP381P38282 291 aaPredicted RBP2.23□□□□□ -2.05
NUP100YKL068W YBR259WP38338 688 aa2.23□□□□□ -2.05
NUP100YKL068W YJL206CP39529 758 aa2.23□□□□□ -2.05
NUP100YKL068W MND2P40577 368 aa2.23□□□□□ -2.05
NUP100YKL068W YJL118WP47022 219 aa2.23□□□□□ -2.05
NUP100YKL068W HSH155P49955 971 aaKnown RBP2.23□□□□□ -2.05
NUP100YKL068W MRPS35P53292 345 aa2.23□□□□□ -2.05
NUP100YKL068W FIN1Q03898 291 aa2.23□□□□□ -2.05
NUP100YKL068W COQ9Q05779 260 aa2.23□□□□□ -2.05
NUP100YKL068W RXT3Q07458 294 aa2.23□□□□□ -2.05
NUP100YKL068W YOL159CQ08300 171 aa2.23□□□□□ -2.05
NUP100YKL068W DIA2Q08496 732 aaPredicted RBP2.23□□□□□ -2.05
NUP100YKL068W GEP3Q08622 556 aa2.23□□□□□ -2.05
NUP100YKL068W VAM3Q12241 283 aa2.23□□□□□ -2.05
NUP100YKL068W SWM1Q12379 170 aa2.23□□□□□ -2.05
NUP100YKL068W LPX1Q12405 387 aaKnown RBP2.23□□□□□ -2.05
NUP100YKL068W MTR10Q99189 972 aa2.23□□□□□ -2.05
NUP100YKL068W COX1P00401 534 aa2.23□□□□□ -2.05
NUP100YKL068W RAP1P11938 827 aa2.23□□□□□ -2.05
NUP100YKL068W CHS2P14180 963 aa2.23□□□□□ -2.05
NUP100YKL068W PRP16P15938 1071 aaPredicted RBP2.23□□□□□ -2.05
NUP100YKL068W IMG1P25626 169 aa2.23□□□□□ -2.05
NUP100YKL068W CDC20P26309 610 aa2.23□□□□□ -2.05
NUP100YKL068W HIR2P32480 875 aa2.23□□□□□ -2.05
NUP100YKL068W ASC1P38011 319 aaKnown RBP2.23□□□□□ -2.05
NUP100YKL068W SDS3P40505 327 aa2.23□□□□□ -2.05
NUP100YKL068W UBX6P47049 396 aa2.23□□□□□ -2.05
NUP100YKL068W URB2P47108 1174 aa2.23□□□□□ -2.05
NUP100YKL068W MSE1P48525 536 aa2.23□□□□□ -2.05
NUP100YKL068W ESBP6P53918 673 aa2.23□□□□□ -2.05
NUP100YKL068W WAR1Q03631 944 aa2.23□□□□□ -2.05
NUP100YKL068W YMR160WQ03823 816 aa2.23□□□□□ -2.05
NUP100YKL068W ARG7Q04728 441 aa2.23□□□□□ -2.05
NUP100YKL068W MRPL35Q06678 367 aa2.23□□□□□ -2.05
NUP100YKL068W RKM1Q08961 583 aaPredicted RBP2.23□□□□□ -2.05
NUP100YKL068W YDR215CQ12240 137 aa2.23□□□□□ -2.05
NUP100YKL068W YER175W-AQ8TGU4 54 aa2.23□□□□□ -2.05
NUP100YKL068W AI5_ALPHAQ9ZZX1 630 aa2.23□□□□□ -2.05
NUP100YKL068W MSB2P32334 1306 aa2.22□□□□□ -2.05
NUP100YKL068W RPL31BP0C2H9 113 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W ERG11P10614 530 aa2.22□□□□□ -2.05
NUP100YKL068W PMR1P13586 950 aa2.22□□□□□ -2.05
NUP100YKL068W ART10P18634 518 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W CKA2P19454 339 aa2.22□□□□□ -2.05
NUP100YKL068W VPS34P22543 875 aa2.22□□□□□ -2.05
NUP100YKL068W ELO2P25358 347 aa2.22□□□□□ -2.05
NUP100YKL068W YCR016WP25617 290 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W ACP1P32463 125 aa2.22□□□□□ -2.05
NUP100YKL068W OCT1P35999 772 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms