RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C MFG1Q07684 458 aa3.19□□□□□ -1.9
YIR040CYIR040C GUD1Q07729 489 aa3.19□□□□□ -1.9
YIR040CYIR040C IRC10Q08118 586 aa3.19□□□□□ -1.9
YIR040CYIR040C YOL019WQ08157 551 aa3.19□□□□□ -1.9
YIR040CYIR040C YOL075CQ08234 1294 aa3.19□□□□□ -1.9
YIR040CYIR040C REX4Q08237 289 aa3.19□□□□□ -1.9
YIR040CYIR040C UIP4Q08926 304 aa3.19□□□□□ -1.9
YIR040CYIR040C TGS1Q12052 315 aa3.19□□□□□ -1.9
YIR040CYIR040C FYV7Q12247 151 aa3.19□□□□□ -1.9
YIR040CYIR040C RPN5Q12250 445 aaKnown RBP3.19□□□□□ -1.9
YIR040CYIR040C ZRT2Q12436 422 aa3.19□□□□□ -1.9
YIR040CYIR040C AGC1Q12482 902 aa3.19□□□□□ -1.9
YIR040CYIR040C Q0144Q9ZZW2 109 aa3.19□□□□□ -1.9
YIR040CYIR040C YPK9Q12697 1472 aa3.19□□□□□ -1.9
YIR040CYIR040C YGL041W-AP0C5N3 154 aa3.18□□□□□ -1.9
YIR040CYIR040C HMG2P12684 1045 aa3.18□□□□□ -1.9
YIR040CYIR040C KRS1P15180 591 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C EST1P17214 699 aaPredicted RBP3.18□□□□□ -1.9
YIR040CYIR040C COQ1P18900 473 aa3.18□□□□□ -1.9
YIR040CYIR040C AMD2P22580 549 aa3.18□□□□□ -1.9
YIR040CYIR040C GSH1P32477 678 aa3.18□□□□□ -1.9
YIR040CYIR040C MSS1P32559 526 aaPredicted RBP3.18□□□□□ -1.9
YIR040CYIR040C GSP1P32835 219 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C GSP2P32836 220 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C SER1P33330 395 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C GCS1P35197 352 aa3.18□□□□□ -1.9
YIR040CYIR040C MRPL36P36531 177 aa3.18□□□□□ -1.9
YIR040CYIR040C AGP2P38090 596 aa3.18□□□□□ -1.9
YIR040CYIR040C ICS2P38284 255 aa3.18□□□□□ -1.9
YIR040CYIR040C YHR097CP38809 366 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C LNP1P38878 278 aa3.18□□□□□ -1.9
YIR040CYIR040C MNN9P39107 395 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C OAF1P39720 1047 aaPredicted RBP3.18□□□□□ -1.9
YIR040CYIR040C YEL025CP39991 1188 aa3.18□□□□□ -1.9
YIR040CYIR040C JHD1P40034 492 aa3.18□□□□□ -1.9
YIR040CYIR040C GET2P40056 285 aa3.18□□□□□ -1.9
YIR040CYIR040C YNL195CP40168 261 aa3.18□□□□□ -1.9
YIR040CYIR040C QRI1P43123 477 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C FET5P43561 622 aa3.18□□□□□ -1.9
YIR040CYIR040C YFR018CP43599 363 aa3.18□□□□□ -1.9
YIR040CYIR040C BNA3P47039 444 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C YJR154WP47181 346 aa3.18□□□□□ -1.9
YIR040CYIR040C YGL159WP53110 370 aa3.18□□□□□ -1.9
YIR040CYIR040C CUE3P53137 624 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C SGF73P53165 657 aa3.18□□□□□ -1.9
YIR040CYIR040C COQ6P53318 479 aa3.18□□□□□ -1.9
YIR040CYIR040C PRM1P53835 661 aa3.18□□□□□ -1.9
YIR040CYIR040C PDR16P53860 351 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C TIM44Q01852 431 aa3.18□□□□□ -1.9
YIR040CYIR040C MMT1Q03218 510 aa3.18□□□□□ -1.9
YIR040CYIR040C WAR1Q03631 944 aa3.18□□□□□ -1.9
YIR040CYIR040C EFR3Q03653 782 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C CDC123Q05791 360 aa3.18□□□□□ -1.9
YIR040CYIR040C SDO1Q07953 250 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C RRP40Q08285 240 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C LEA1Q08963 238 aaPredicted RBP3.18□□□□□ -1.9
YIR040CYIR040C NUR1Q12066 484 aa3.18□□□□□ -1.9
YIR040CYIR040C SPE3Q12074 293 aaKnown RBP3.18□□□□□ -1.9
YIR040CYIR040C APC9Q12107 265 aa3.18□□□□□ -1.9
YIR040CYIR040C YOL107WQ12239 342 aa3.18□□□□□ -1.9
YIR040CYIR040C RTN2Q12443 393 aa3.18□□□□□ -1.9
YIR040CYIR040C AI5_BETAQ9ZZX0 354 aa3.18□□□□□ -1.9
YIR040CYIR040C YLR278CQ05854 1341 aa3.18□□□□□ -1.9
YIR040CYIR040C RPO41P13433 1351 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C SEC53P07283 254 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C NUC1P08466 329 aa3.17□□□□□ -1.9
YIR040CYIR040C ERG20P08524 352 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C MAS1P10507 462 aa3.17□□□□□ -1.9
YIR040CYIR040C ZWF1P11412 505 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C NHP6BP11633 99 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C MAS2P11914 482 aa3.17□□□□□ -1.9
YIR040CYIR040C SNA3P14359 133 aa3.17□□□□□ -1.9
YIR040CYIR040C AIM17P23180 465 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C RNA14P25298 677 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C RHB1P25378 209 aa3.17□□□□□ -1.9
YIR040CYIR040C SGF29P25554 259 aa3.17□□□□□ -1.9
YIR040CYIR040C YCL049CP25577 312 aa3.17□□□□□ -1.9
YIR040CYIR040C PPA2P28239 310 aa3.17□□□□□ -1.9
YIR040CYIR040C URA7P28274 579 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C RPT5P33297 434 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C RPS1AP33442 255 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C SPO23P33757 523 aa3.17□□□□□ -1.9
YIR040CYIR040C PTK1P36002 662 aaPredicted RBP3.17□□□□□ -1.9
YIR040CYIR040C VPS21P36017 210 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C ELF1P36053 145 aa3.17□□□□□ -1.9
YIR040CYIR040C AIM29P36154 155 aa3.17□□□□□ -1.9
YIR040CYIR040C GEX2P36173 615 aa3.17□□□□□ -1.9
YIR040CYIR040C SPP381P38282 291 aaPredicted RBP3.17□□□□□ -1.9
YIR040CYIR040C BIT2P38346 545 aa3.17□□□□□ -1.9
YIR040CYIR040C YHR045WP38775 560 aa3.17□□□□□ -1.9
YIR040CYIR040C SFB3P38810 929 aa3.17□□□□□ -1.9
YIR040CYIR040C SPC97P38863 823 aa3.17□□□□□ -1.9
YIR040CYIR040C CYC2P38909 366 aa3.17□□□□□ -1.9
YIR040CYIR040C DDI1P40087 428 aa3.17□□□□□ -1.9
YIR040CYIR040C SER33P40510 469 aa3.17□□□□□ -1.9
YIR040CYIR040C VMA13P41807 478 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C TFG2P41896 400 aaPredicted RBP3.17□□□□□ -1.9
YIR040CYIR040C NIT2P47016 307 aa3.17□□□□□ -1.9
YIR040CYIR040C RPC17P47076 161 aa3.17□□□□□ -1.9
YIR040CYIR040C MRX6P48564 524 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms