RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C TY3A-IQ99219 290 aa3.26□□□□□ -1.89
PCI8YIL071C UBR1P19812 1950 aa3.26□□□□□ -1.89
PCI8YIL071C TPK1P06244 397 aa3.25□□□□□ -1.89
PCI8YIL071C RNA1P11745 407 aaKnown RBP3.25□□□□□ -1.89
PCI8YIL071C PHO81P17442 1178 aa3.25□□□□□ -1.89
PCI8YIL071C EXO70P19658 623 aa3.25□□□□□ -1.89
PCI8YIL071C SPS22P25380 463 aa3.25□□□□□ -1.89
PCI8YIL071C SIP2P34164 415 aaKnown RBP3.25□□□□□ -1.89
PCI8YIL071C FZO1P38297 855 aa3.25□□□□□ -1.89
PCI8YIL071C DIA4P38705 446 aaPredicted RBP3.25□□□□□ -1.89
PCI8YIL071C YHL041WP38730 149 aa3.25□□□□□ -1.89
PCI8YIL071C ARO9P38840 513 aaPredicted RBP3.25□□□□□ -1.89
PCI8YIL071C STN1P38960 494 aa3.25□□□□□ -1.89
PCI8YIL071C YDR089WP38966 869 aa3.25□□□□□ -1.89
PCI8YIL071C SSP120P39931 234 aaKnown RBP3.25□□□□□ -1.89
PCI8YIL071C AVT2P39981 480 aa3.25□□□□□ -1.89
PCI8YIL071C ERR3P42222 437 aa3.25□□□□□ -1.89
PCI8YIL071C YFL012WP43580 148 aa3.25□□□□□ -1.89
PCI8YIL071C RRT5P43607 289 aa3.25□□□□□ -1.89
PCI8YIL071C PUS4P48567 403 aaKnown RBP3.25□□□□□ -1.89
PCI8YIL071C USE1P53146 245 aa3.25□□□□□ -1.89
PCI8YIL071C ALG11P53954 548 aaKnown RBP3.25□□□□□ -1.89
PCI8YIL071C ARP9Q05123 467 aa3.25□□□□□ -1.89
PCI8YIL071C DIN7Q12086 430 aa3.25□□□□□ -1.89
PCI8YIL071C SEC39Q12745 709 aa3.25□□□□□ -1.89
PCI8YIL071C PWP1P21304 576 aaKnown RBP3.24□□□□□ -1.89
PCI8YIL071C REC107P21651 314 aa3.24□□□□□ -1.89
PCI8YIL071C PET309P32522 965 aaPredicted RBP3.24□□□□□ -1.89
PCI8YIL071C MRE11P32829 692 aa3.24□□□□□ -1.89
PCI8YIL071C CYM1P32898 989 aa3.24□□□□□ -1.89
PCI8YIL071C TIF3P34167 436 aaKnown RBP3.24□□□□□ -1.89
PCI8YIL071C SDS22P36047 338 aa3.24□□□□□ -1.89
PCI8YIL071C APE3P37302 537 aaKnown RBP3.24□□□□□ -1.89
PCI8YIL071C RIM2P38127 377 aa3.24□□□□□ -1.89
PCI8YIL071C TSC10P38342 320 aa3.24□□□□□ -1.89
PCI8YIL071C STB5P38699 743 aa3.24□□□□□ -1.89
PCI8YIL071C AIM18P38884 321 aa3.24□□□□□ -1.89
PCI8YIL071C RIO2P40160 425 aaKnown RBP3.24□□□□□ -1.89
PCI8YIL071C PEP8P40335 379 aa3.24□□□□□ -1.89
PCI8YIL071C HIS6P40545 261 aa3.24□□□□□ -1.89
PCI8YIL071C MAD2P40958 196 aa3.24□□□□□ -1.89
PCI8YIL071C LAM5P43560 674 aa3.24□□□□□ -1.89
PCI8YIL071C POL31P46957 487 aa3.24□□□□□ -1.89
PCI8YIL071C IML2P47031 731 aa3.24□□□□□ -1.89
PCI8YIL071C MAD3P47074 515 aa3.24□□□□□ -1.89
PCI8YIL071C MNT2P53059 558 aa3.24□□□□□ -1.89
PCI8YIL071C NOP13P53883 403 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PCI8YIL071C MUB1Q03162 620 aa3.24□□□□□ -1.89
PCI8YIL071C ADD37Q03233 198 aa3.24□□□□□ -1.89
PCI8YIL071C CWC21Q03375 135 aaKnown RBP3.24□□□□□ -1.89
PCI8YIL071C GTB1Q04924 702 aa3.24□□□□□ -1.89
PCI8YIL071C SLD7Q08457 257 aa3.24□□□□□ -1.89
PCI8YIL071C SNX3Q08826 162 aaKnown RBP3.24□□□□□ -1.89
PCI8YIL071C LEA1Q08963 238 aaPredicted RBP3.24□□□□□ -1.89
PCI8YIL071C RTK1Q12100 620 aaPredicted RBP3.24□□□□□ -1.89
PCI8YIL071C GPA2P10823 449 aa3.23□□□□□ -1.89
PCI8YIL071C SNA3P14359 133 aa3.23□□□□□ -1.89
PCI8YIL071C HNM1P19807 563 aa3.23□□□□□ -1.89
PCI8YIL071C GID7P25569 745 aa3.23□□□□□ -1.89
PCI8YIL071C RPC19P28000 142 aaKnown RBP3.23□□□□□ -1.89
PCI8YIL071C RAD14P28519 371 aa3.23□□□□□ -1.89
PCI8YIL071C URA10P30402 227 aa3.23□□□□□ -1.89
PCI8YIL071C SSH4P32343 579 aa3.23□□□□□ -1.89
PCI8YIL071C TOA1P32773 286 aa3.23□□□□□ -1.89
PCI8YIL071C RPF2P36160 344 aaKnown RBP3.23□□□□□ -1.89
PCI8YIL071C ALG5P40350 334 aa3.23□□□□□ -1.89
PCI8YIL071C BUD32P53323 261 aa3.23□□□□□ -1.89
PCI8YIL071C RCF2P53721 224 aa3.23□□□□□ -1.89
PCI8YIL071C YMR209CQ03648 457 aa3.23□□□□□ -1.89
PCI8YIL071C TVP15Q03860 143 aa3.23□□□□□ -1.89
PCI8YIL071C CAC2Q04199 468 aa3.23□□□□□ -1.89
PCI8YIL071C ECM38Q05902 660 aaPredicted RBP3.23□□□□□ -1.89
PCI8YIL071C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
PCI8YIL071C THI20Q08224 551 aa3.23□□□□□ -1.89
PCI8YIL071C MCH4Q08268 501 aa3.23□□□□□ -1.89
PCI8YIL071C HOS1Q12214 470 aa3.23□□□□□ -1.89
PCI8YIL071C YMR030W-AQ3E760 96 aa3.23□□□□□ -1.89
PCI8YIL071C MSS18P08593 268 aa3.22□□□□□ -1.89
PCI8YIL071C GCY1P14065 312 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
PCI8YIL071C HSP26P15992 214 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
PCI8YIL071C SEC14P24280 304 aaKnown RBP3.22□□□□□ -1.89
PCI8YIL071C LRE1P25579 583 aaKnown RBP3.22□□□□□ -1.89
PCI8YIL071C SIN4P32259 974 aa3.22□□□□□ -1.89
PCI8YIL071C SMI1P32566 505 aa3.22□□□□□ -1.89
PCI8YIL071C SSE1P32589 693 aaKnown RBP3.22□□□□□ -1.89
PCI8YIL071C KDX1P36005 433 aa3.22□□□□□ -1.89
PCI8YIL071C PHO89P38361 574 aa3.22□□□□□ -1.89
PCI8YIL071C YHL026CP38740 315 aa3.22□□□□□ -1.89
PCI8YIL071C TVP23P38962 199 aa3.22□□□□□ -1.89
PCI8YIL071C STL1P39932 569 aa3.22□□□□□ -1.89
PCI8YIL071C JEM1P40358 645 aa3.22□□□□□ -1.89
PCI8YIL071C ATM1P40416 690 aa3.22□□□□□ -1.89
PCI8YIL071C DPH1P40487 425 aaKnown RBP3.22□□□□□ -1.89
PCI8YIL071C YIL001WP40560 513 aa3.22□□□□□ -1.89
PCI8YIL071C FAR3P46671 204 aa3.22□□□□□ -1.89
PCI8YIL071C ASK10P48361 1146 aa3.22□□□□□ -1.89
PCI8YIL071C ASN2P49090 572 aaKnown RBP3.22□□□□□ -1.89
PCI8YIL071C MIG2P53035 382 aa3.22□□□□□ -1.89
PCI8YIL071C MRM2P53123 320 aa3.22□□□□□ -1.89
PCI8YIL071C PEX31P53203 462 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms