RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MUP1P50276 574 aa13.3□□□□□ -0.28
RPN10YHR200W ERG26P53199 349 aaKnown RBP13.3□□□□□ -0.28
RPN10YHR200W YDL129WQ07555 291 aa13.3□□□□□ -0.28
RPN10YHR200W YOL159CQ08300 171 aa13.3□□□□□ -0.28
RPN10YHR200W LAG2Q92325 660 aa13.3□□□□□ -0.28
RPN10YHR200W YPR096CO13587 100 aa13.29□□□□□ -0.28
RPN10YHR200W PEX3P28795 441 aa13.29□□□□□ -0.28
RPN10YHR200W CAT2P32796 670 aaKnown RBP13.29□□□□□ -0.28
RPN10YHR200W ARA1P38115 344 aa13.29□□□□□ -0.28
RPN10YHR200W RGA1P39083 1007 aa13.29□□□□□ -0.28
RPN10YHR200W ECM10P39987 644 aa13.29□□□□□ -0.28
RPN10YHR200W YNR068CP53754 272 aa13.29□□□□□ -0.28
RPN10YHR200W MLH3Q12083 715 aa13.29□□□□□ -0.28
RPN10YHR200W RPS17AP02407 136 aaKnown RBP13.28□□□□□ -0.28
RPN10YHR200W STE7P06784 515 aa13.28□□□□□ -0.28
RPN10YHR200W MST1P07236 462 aa13.28□□□□□ -0.28
RPN10YHR200W RPS17BP14127 136 aaKnown RBP13.28□□□□□ -0.28
RPN10YHR200W CBS2P14905 389 aa13.28□□□□□ -0.28
RPN10YHR200W CMK2P22517 447 aa13.28□□□□□ -0.28
RPN10YHR200W NUP2P32499 720 aa13.28□□□□□ -0.28
RPN10YHR200W SKG1P36169 355 aa13.28□□□□□ -0.28
RPN10YHR200W RIO2P40160 425 aaKnown RBP13.28□□□□□ -0.28
RPN10YHR200W NDL1Q06568 189 aa13.28□□□□□ -0.28
RPN10YHR200W PSY3Q12318 242 aa13.28□□□□□ -0.28
RPN10YHR200W LEU4P06208 619 aaKnown RBP13.27□□□□□ -0.29
RPN10YHR200W DAP2P18962 818 aa13.27□□□□□ -0.29
RPN10YHR200W SPB1P25582 841 aaPredicted RBP13.27□□□□□ -0.29
RPN10YHR200W MET30P39014 640 aa13.27□□□□□ -0.29
RPN10YHR200W MTW1P39731 289 aa13.27□□□□□ -0.29
RPN10YHR200W AZF1P41696 914 aa13.27□□□□□ -0.29
RPN10YHR200W RRN11Q04712 507 aa13.27□□□□□ -0.29
RPN10YHR200W MFB1Q04922 465 aa13.27□□□□□ -0.29
RPN10YHR200W REX4Q08237 289 aa13.27□□□□□ -0.29
RPN10YHR200W LEU9Q12166 604 aaKnown RBP13.27□□□□□ -0.29
RPN10YHR200W YLR111WQ12528 110 aa13.27□□□□□ -0.29
RPN10YHR200W MDM12Q92328 271 aa13.27□□□□□ -0.29
RPN10YHR200W RAD7P06779 565 aa13.26□□□□□ -0.29
RPN10YHR200W PTP1P25044 335 aa13.26□□□□□ -0.29
RPN10YHR200W CDC13P32797 924 aaKnown RBP13.26□□□□□ -0.29
RPN10YHR200W UGP1P32861 499 aaKnown RBP13.26□□□□□ -0.29
RPN10YHR200W RCK1P38622 512 aa13.26□□□□□ -0.29
RPN10YHR200W PSA1P41940 361 aaKnown RBP13.26□□□□□ -0.29
RPN10YHR200W ARE2P53629 642 aaKnown RBP13.26□□□□□ -0.29
RPN10YHR200W YDR444WQ04093 687 aa13.26□□□□□ -0.29
RPN10YHR200W PDR8Q06149 701 aa13.26□□□□□ -0.29
RPN10YHR200W PUS9Q12069 462 aa13.26□□□□□ -0.29
RPN10YHR200W DIN7Q12086 430 aa13.26□□□□□ -0.29
RPN10YHR200W MHF2Q3E829 80 aa13.26□□□□□ -0.29
RPN10YHR200W DMC1P25453 334 aa13.25□□□□□ -0.29
RPN10YHR200W CTS1P29029 562 aa13.25□□□□□ -0.29
RPN10YHR200W SSO1P32867 290 aa13.25□□□□□ -0.29
RPN10YHR200W LYS1P38998 373 aaRIP-Chip data13.25□□□□□ -0.29not detected
RPN10YHR200W RBG1P39729 369 aa13.25□□□□□ -0.29
RPN10YHR200W PRM10P42946 383 aa13.25□□□□□ -0.29
RPN10YHR200W HXT16P47185 567 aa13.25□□□□□ -0.29
RPN10YHR200W RTS3P53289 263 aa13.25□□□□□ -0.29
RPN10YHR200W HXT15P54854 567 aa13.25□□□□□ -0.29
RPN10YHR200W GPI11Q06636 219 aa13.25□□□□□ -0.29
RPN10YHR200W MEU1Q07938 337 aaKnown RBP RIP-Chip data13.25□□□□□ -0.29not detected
RPN10YHR200W YOL131WQ08270 108 aa13.25□□□□□ -0.29
RPN10YHR200W YDR262WQ12331 272 aa13.25□□□□□ -0.29
RPN10YHR200W PFK27Q12471 397 aaPredicted RBP13.25□□□□□ -0.29
RPN10YHR200W FBA1P14540 359 aaKnown RBP13.24□□□□□ -0.29
RPN10YHR200W SRB5P32585 307 aa13.24□□□□□ -0.29
RPN10YHR200W PLB1P39105 664 aa13.24□□□□□ -0.29
RPN10YHR200W CEM1P39525 442 aa13.24□□□□□ -0.29
RPN10YHR200W RSP5P39940 809 aaKnown RBP13.24□□□□□ -0.29
RPN10YHR200W LRO1P40345 661 aa13.24□□□□□ -0.29
RPN10YHR200W SNL1P40548 159 aa13.24□□□□□ -0.29
RPN10YHR200W FET5P43561 622 aa13.24□□□□□ -0.29
RPN10YHR200W YJR142WP47173 342 aa13.24□□□□□ -0.29
RPN10YHR200W BIO3P50277 480 aa13.24□□□□□ -0.29
RPN10YHR200W THP1Q08231 455 aa13.24□□□□□ -0.29
RPN10YHR200W RRP40Q08285 240 aaKnown RBP13.24□□□□□ -0.29
RPN10YHR200W YOL107WQ12239 342 aa13.24□□□□□ -0.29
RPN10YHR200W RRP12Q12754 1228 aaKnown RBP13.24□□□□□ -0.29
RPN10YHR200W HTA1P04911 132 aaKnown RBP13.23□□□□□ -0.29
RPN10YHR200W GAL3P13045 520 aa13.23□□□□□ -0.29
RPN10YHR200W CLB4P24871 460 aa13.23□□□□□ -0.29
RPN10YHR200W IDH2P28241 369 aaKnown RBP13.23□□□□□ -0.29
RPN10YHR200W ERV46P39727 415 aa13.23□□□□□ -0.29
RPN10YHR200W PTC2P39966 464 aaKnown RBP13.23□□□□□ -0.29
RPN10YHR200W YJL043WP47053 257 aa13.23□□□□□ -0.29
RPN10YHR200W SKI8Q02793 397 aaPredicted RBP13.23□□□□□ -0.29
RPN10YHR200W YML096WQ04489 525 aa13.23□□□□□ -0.29
RPN10YHR200W GAL7P08431 366 aa13.22□□□□□ -0.29
RPN10YHR200W SPC34P36131 295 aa13.22□□□□□ -0.29
RPN10YHR200W EHT1P38295 451 aa13.22□□□□□ -0.29
RPN10YHR200W THO1P40040 218 aaKnown RBP13.22□□□□□ -0.29
RPN10YHR200W GVP36P40531 326 aaKnown RBP13.22□□□□□ -0.29
RPN10YHR200W PAC11P40960 533 aa13.22□□□□□ -0.29
RPN10YHR200W AGP3P43548 558 aa13.22□□□□□ -0.29
RPN10YHR200W CIS3P47001 227 aa13.22□□□□□ -0.29
RPN10YHR200W RAD17P48581 401 aa13.22□□□□□ -0.29
RPN10YHR200W RMR1P53060 241 aa13.22□□□□□ -0.29
RPN10YHR200W ROG1P53118 685 aa13.22□□□□□ -0.29
RPN10YHR200W BNI4P53858 892 aa13.22□□□□□ -0.29
RPN10YHR200W YMR226CQ05016 267 aaKnown RBP13.22□□□□□ -0.29
RPN10YHR200W BOP2Q06150 570 aa13.22□□□□□ -0.29
RPN10YHR200W YOL159C-AQ3E769 90 aa13.22□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms