RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YBL055CP34220 418 aaPredicted RBP2.38□□□□□ -2.03
TRA1YHR099W BUR6P40096 142 aa2.38□□□□□ -2.03
TRA1YHR099W NSE4P43124 402 aa2.38□□□□□ -2.03
TRA1YHR099W YFL054CP43549 646 aa2.38□□□□□ -2.03
TRA1YHR099W CLA4P48562 842 aa2.38□□□□□ -2.03
TRA1YHR099W TWF1P53250 332 aa2.38□□□□□ -2.03
TRA1YHR099W DCP2P53550 970 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W ELP4Q02884 456 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W YLR177WQ06251 628 aa2.38□□□□□ -2.03
TRA1YHR099W YDL086WQ07505 273 aa2.38□□□□□ -2.03
TRA1YHR099W SUS1Q6WNK7 96 aa2.38□□□□□ -2.03
TRA1YHR099W SAS5Q99314 248 aa2.38□□□□□ -2.03
TRA1YHR099W NUP145P49687 1317 aa2.38□□□□□ -2.03
TRA1YHR099W SEC1P30619 724 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W FBP26P32604 452 aa2.38□□□□□ -2.03
TRA1YHR099W PNT1P38969 423 aa2.38□□□□□ -2.03
TRA1YHR099W SEC72P39742 193 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W APQ12P40532 138 aa2.38□□□□□ -2.03
TRA1YHR099W HIT1P46973 164 aa2.38□□□□□ -2.03
TRA1YHR099W YDL183CP48569 320 aa2.38□□□□□ -2.03
TRA1YHR099W VPS73P53142 486 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W PNG1Q02890 363 aa2.38□□□□□ -2.03
TRA1YHR099W FMN1Q03778 218 aa2.38□□□□□ -2.03
TRA1YHR099W CUR1Q06469 252 aa2.38□□□□□ -2.03
TRA1YHR099W YIG1Q08956 461 aa2.38□□□□□ -2.03
TRA1YHR099W UPC2Q12151 913 aa2.38□□□□□ -2.03
TRA1YHR099W MSH5Q12175 901 aa2.38□□□□□ -2.03
TRA1YHR099W SYP1P25623 870 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W DTR1P38125 572 aa2.38□□□□□ -2.03
TRA1YHR099W OSH7P38755 437 aa2.38□□□□□ -2.03
TRA1YHR099W YHK8P38776 514 aa2.38□□□□□ -2.03
TRA1YHR099W TRR2P38816 342 aa2.38□□□□□ -2.03
TRA1YHR099W PDR8Q06149 701 aa2.38□□□□□ -2.03
TRA1YHR099W THI22Q06490 572 aa2.38□□□□□ -2.03
TRA1YHR099W YPR084WQ06821 456 aa2.38□□□□□ -2.03
TRA1YHR099W ASR1Q06834 288 aa2.38□□□□□ -2.03
TRA1YHR099W HRT1Q08273 121 aa2.38□□□□□ -2.03
TRA1YHR099W MED1Q12321 566 aa2.38□□□□□ -2.03
TRA1YHR099W RPO41P13433 1351 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W ILV3P39522 585 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W YJR142WP47173 342 aa2.38□□□□□ -2.03
TRA1YHR099W NCS6P53088 359 aa2.38□□□□□ -2.03
TRA1YHR099W COG7P53195 279 aa2.38□□□□□ -2.03
TRA1YHR099W TGL2P54857 326 aa2.38□□□□□ -2.03
TRA1YHR099W TIM44Q01852 431 aa2.38□□□□□ -2.03
TRA1YHR099W UTP15Q04305 513 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W IES4Q08561 116 aa2.38□□□□□ -2.03
TRA1YHR099W PDH1Q12428 516 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W PCL2P25693 308 aa2.38□□□□□ -2.03
TRA1YHR099W LHP1P33399 275 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W APL3P38065 1025 aa2.38□□□□□ -2.03
TRA1YHR099W IML3P38265 245 aa2.38□□□□□ -2.03
TRA1YHR099W YGL176CP46945 554 aa2.38□□□□□ -2.03
TRA1YHR099W MNN5P46982 586 aa2.38□□□□□ -2.03
TRA1YHR099W SYF2P53277 215 aaPredicted RBP2.38□□□□□ -2.03
TRA1YHR099W UBX4P54730 416 aa2.38□□□□□ -2.03
TRA1YHR099W FMP42Q04991 504 aa2.38□□□□□ -2.03
TRA1YHR099W CTR3Q06686 241 aa2.38□□□□□ -2.03
TRA1YHR099W YPR202WQ08993 238 aa2.38□□□□□ -2.03
TRA1YHR099W BAG7Q12128 409 aa2.38□□□□□ -2.03
TRA1YHR099W SPE1P08432 466 aa2.38□□□□□ -2.03
TRA1YHR099W ZWF1P11412 505 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W GSH1P32477 678 aa2.38□□□□□ -2.03
TRA1YHR099W PAH1P32567 862 aa2.38□□□□□ -2.03
TRA1YHR099W LIP5P32875 414 aa2.38□□□□□ -2.03
TRA1YHR099W APT2P36973 181 aa2.38□□□□□ -2.03
TRA1YHR099W YPT35P38815 214 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W PLB1P39105 664 aa2.38□□□□□ -2.03
TRA1YHR099W AIM20P40451 204 aa2.38□□□□□ -2.03
TRA1YHR099W BNA6P43619 295 aa2.38□□□□□ -2.03
TRA1YHR099W HHT1P61830 136 aa2.38□□□□□ -2.03
TRA1YHR099W DPL1Q05567 589 aa2.38□□□□□ -2.03
TRA1YHR099W YPR027CQ12079 277 aa2.38□□□□□ -2.03
TRA1YHR099W YIL177CP40434 1758 aa2.37□□□□□ -2.03
TRA1YHR099W YJL225CP40889 1758 aa2.37□□□□□ -2.03
TRA1YHR099W PHR1P05066 565 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TRA1YHR099W NPR1P22211 790 aa2.37□□□□□ -2.03
TRA1YHR099W KIN82P25341 720 aa2.37□□□□□ -2.03
TRA1YHR099W FEN2P25621 512 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W SLC1P33333 303 aa2.37□□□□□ -2.03
TRA1YHR099W TGL1P34163 548 aa2.37□□□□□ -2.03
TRA1YHR099W APS1P35181 156 aa2.37□□□□□ -2.03
TRA1YHR099W AIM29P36154 155 aa2.37□□□□□ -2.03
TRA1YHR099W RPF2P36160 344 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W PCH2P38126 564 aa2.37□□□□□ -2.03
TRA1YHR099W ATX1P38636 73 aa2.37□□□□□ -2.03
TRA1YHR099W YHR033WP38690 423 aa2.37□□□□□ -2.03
TRA1YHR099W PCF11P39081 626 aaPredicted RBP2.37□□□□□ -2.03
TRA1YHR099W YFL052WP43551 465 aa2.37□□□□□ -2.03
TRA1YHR099W ALB1P47019 175 aaPredicted RBP2.37□□□□□ -2.03
TRA1YHR099W FRE6Q12473 712 aa2.37□□□□□ -2.03
TRA1YHR099W SWI4P25302 1093 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W CYS4P32582 507 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W PAM1P37304 830 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W PIH1P38768 344 aa2.37□□□□□ -2.03
TRA1YHR099W MAF1P41910 395 aa2.37□□□□□ -2.03
TRA1YHR099W LSB6P42951 607 aa2.37□□□□□ -2.03
TRA1YHR099W IMD4P50094 524 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W YNR064CP53750 290 aa2.37□□□□□ -2.03
TRA1YHR099W YDR124WQ04608 324 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms