RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YDR262WQ12331 272 aa3.54□□□□□ -1.84
PDX1YGR193C IES3Q12345 250 aa3.54□□□□□ -1.84
PDX1YGR193C RTR2Q12378 196 aa3.54□□□□□ -1.84
PDX1YGR193C AFI1Q99222 893 aa3.54□□□□□ -1.84
PDX1YGR193C EDE1P34216 1381 aa3.53□□□□□ -1.84
PDX1YGR193C TDH2P00358 332 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C TDH3P00359 332 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
PDX1YGR193C RPL4AP10664 362 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C URA4P20051 364 aa3.53□□□□□ -1.84
PDX1YGR193C ZRC1P20107 442 aa3.53□□□□□ -1.84
PDX1YGR193C YCP4P25349 247 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C CIN8P27895 1000 aa3.53□□□□□ -1.84
PDX1YGR193C BEM1P29366 551 aa3.53□□□□□ -1.84
PDX1YGR193C TCA17P32613 152 aa3.53□□□□□ -1.84
PDX1YGR193C YBL055CP34220 418 aaPredicted RBP3.53□□□□□ -1.84
PDX1YGR193C PET10P36139 283 aa3.53□□□□□ -1.84
PDX1YGR193C YKR078WP36158 585 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C APT2P36973 181 aa3.53□□□□□ -1.84
PDX1YGR193C AGP2P38090 596 aa3.53□□□□□ -1.84
PDX1YGR193C URA8P38627 578 aaPredicted RBP3.53□□□□□ -1.84
PDX1YGR193C HXT6P39003 570 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C HXT7P39004 570 aa3.53□□□□□ -1.84
PDX1YGR193C BDH2P39713 417 aa3.53□□□□□ -1.84
PDX1YGR193C RPH1P39956 796 aa3.53□□□□□ -1.84
PDX1YGR193C YMR134WP40207 237 aa3.53□□□□□ -1.84
PDX1YGR193C ALG8P40351 577 aa3.53□□□□□ -1.84
PDX1YGR193C SNL1P40548 159 aa3.53□□□□□ -1.84
PDX1YGR193C VMA13P41807 478 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C RPA34P47006 233 aaPredicted RBP3.53□□□□□ -1.84
PDX1YGR193C YJL132WP47014 750 aa3.53□□□□□ -1.84
PDX1YGR193C ALY2P47029 1046 aa3.53□□□□□ -1.84
PDX1YGR193C APT1P49435 187 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C RPL4BP49626 362 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C RMD9P53140 646 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C RRP46P53256 223 aaPredicted RBP3.53□□□□□ -1.84
PDX1YGR193C YGR126WP53274 230 aa3.53□□□□□ -1.84
PDX1YGR193C RTT102P53330 157 aa3.53□□□□□ -1.84
PDX1YGR193C RPT4P53549 437 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C ENT5Q03769 411 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C YDR248CQ03786 193 aa3.53□□□□□ -1.84
PDX1YGR193C ROY1Q04847 553 aa3.53□□□□□ -1.84
PDX1YGR193C RQC1Q05468 723 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C CTS2Q06350 511 aa3.53□□□□□ -1.84
PDX1YGR193C ECM30Q06673 1274 aa3.53□□□□□ -1.84
PDX1YGR193C YFH1Q07540 174 aa3.53□□□□□ -1.84
PDX1YGR193C RTT109Q07794 436 aa3.53□□□□□ -1.84
PDX1YGR193C YLR031WQ07978 186 aa3.53□□□□□ -1.84
PDX1YGR193C DCI1Q08558 271 aa3.53□□□□□ -1.84
PDX1YGR193C FRE5Q08908 694 aa3.53□□□□□ -1.84
PDX1YGR193C AKR2Q12013 749 aa3.53□□□□□ -1.84
PDX1YGR193C YLR053CQ12026 108 aa3.53□□□□□ -1.84
PDX1YGR193C MRH1Q12117 320 aaPredicted RBP3.53□□□□□ -1.84
PDX1YGR193C LYS21Q12122 440 aaKnown RBP3.53□□□□□ -1.84
PDX1YGR193C ATG9Q12142 997 aa3.53□□□□□ -1.84
PDX1YGR193C SEY1Q99287 776 aa3.53□□□□□ -1.84
PDX1YGR193C SNT2P53127 1403 aa3.53□□□□□ -1.85
PDX1YGR193C BNR1P40450 1375 aa3.52□□□□□ -1.85
PDX1YGR193C CBP1P07252 654 aa3.52□□□□□ -1.85
PDX1YGR193C ARD1P07347 238 aaPredicted RBP3.52□□□□□ -1.85
PDX1YGR193C LPD1P09624 499 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C TUB3P09734 445 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C RPS21AP0C0V8 87 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C MAS1P10507 462 aa3.52□□□□□ -1.85
PDX1YGR193C NHP6AP11632 93 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C HPR1P17629 752 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C BET2P20133 325 aa3.52□□□□□ -1.85
PDX1YGR193C UBA1P22515 1024 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C RPL24BP24000 155 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C DBR1P24309 405 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C ILV6P25605 309 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C HSP30P25619 332 aa3.52□□□□□ -1.85
PDX1YGR193C YCR061WP25639 631 aa3.52□□□□□ -1.85
PDX1YGR193C CSM1P25651 190 aa3.52□□□□□ -1.85
PDX1YGR193C PPA2P28239 310 aa3.52□□□□□ -1.85
PDX1YGR193C IDH1P28834 360 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
PDX1YGR193C CAM1P29547 415 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C HOG1P32485 435 aa3.52□□□□□ -1.85
PDX1YGR193C PRP21P32524 280 aaPredicted RBP3.52□□□□□ -1.85
PDX1YGR193C GCG1P32656 232 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C MNS1P32906 549 aa3.52□□□□□ -1.85
PDX1YGR193C VAM7P32912 316 aa3.52□□□□□ -1.85
PDX1YGR193C SEF1P34228 1148 aa3.52□□□□□ -1.85
PDX1YGR193C DOA1P36037 715 aa3.52□□□□□ -1.85
PDX1YGR193C SNU114P36048 1008 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C MRPL4P36517 319 aa3.52□□□□□ -1.85
PDX1YGR193C AAP1P37898 856 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C DTR1P38125 572 aa3.52□□□□□ -1.85
PDX1YGR193C YBL029WP38201 376 aa3.52□□□□□ -1.85
PDX1YGR193C FAT1P38225 669 aa3.52□□□□□ -1.85
PDX1YGR193C CST26P38226 397 aa3.52□□□□□ -1.85
PDX1YGR193C VID24P38263 362 aa3.52□□□□□ -1.85
PDX1YGR193C TDP1P38319 544 aa3.52□□□□□ -1.85
PDX1YGR193C LNP1P38878 278 aa3.52□□□□□ -1.85
PDX1YGR193C FCY21P40039 528 aa3.52□□□□□ -1.85
PDX1YGR193C VID28P40547 921 aa3.52□□□□□ -1.85
PDX1YGR193C MET28P40573 187 aa3.52□□□□□ -1.85
PDX1YGR193C SAD1P43589 448 aa3.52□□□□□ -1.85
PDX1YGR193C AMA1P50082 593 aa3.52□□□□□ -1.85
PDX1YGR193C PSP1P50896 841 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C VOA1P53262 265 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms