RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeast

Gene SLX9, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX9	YGR081C	HXT14	P42833	540 aa		2.74	□□□□□ -1.97
SLX9	YGR081C	SDT1	P53078	280 aa		2.74	□□□□□ -1.97
SLX9	YGR081C	TOF1	P53840	1238 aa		2.74	□□□□□ -1.97
SLX9	YGR081C	MHR1	Q06630	226 aa		2.74	□□□□□ -1.97
SLX9	YGR081C	HRT3	Q12347	344 aa		2.74	□□□□□ -1.97
SLX9	YGR081C	RRI2	Q12348	645 aa		2.74	□□□□□ -1.97
SLX9	YGR081C	YLR278C	Q05854	1341 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	PMT1	P33775	817 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	YGR149W	P48236	432 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	GOR1	P53839	350 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	NCS2	P53923	493 aa	Predicted RBP	2.73	□□□□□ -1.97
SLX9	YGR081C	RQC1	Q05468	723 aa	Known RBP	2.73	□□□□□ -1.97
SLX9	YGR081C	BSC6	Q08280	497 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	TMC1	Q08422	150 aa	Predicted RBP	2.73	□□□□□ -1.97
SLX9	YGR081C	RRG7	Q08774	242 aa	Predicted RBP	2.73	□□□□□ -1.97
SLX9	YGR081C	YLR108C	Q12259	485 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	MED1	Q12321	566 aa		2.73	□□□□□ -1.97
SLX9	YGR081C	CDC60	P26637	1090 aa	Known RBP	2.72	□□□□□ -1.97
SLX9	YGR081C	RAD14	P28519	371 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	AFG1	P32317	509 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	GYP6	P32806	458 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	NIP100	P33420	868 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	PTH1	P38876	190 aa	Known RBP	2.72	□□□□□ -1.97
SLX9	YGR081C	MST28	P39552	234 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	YIP1	P53039	248 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	PCP1	P53259	346 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	PAL1	Q05518	499 aa	Known RBP	2.72	□□□□□ -1.97
SLX9	YGR081C	RBD2	Q12270	262 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	RAD61	Q99359	647 aa		2.72	□□□□□ -1.97
SLX9	YGR081C	ADH2	P00331	348 aa	Known RBP	2.71	□□□□□ -1.98
SLX9	YGR081C	HXT1	P32465	570 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	ECM25	P32525	599 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	SDH3	P33421	198 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	STB6	P36085	766 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	RRT2	P38332	387 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	PRM5	P40476	318 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	WWM1	P43582	211 aa	Known RBP	2.71	□□□□□ -1.98
SLX9	YGR081C	SSN8	P47821	323 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	TIS11	P47977	285 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	RIM20	Q12033	661 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	GRX6	Q12438	231 aa		2.71	□□□□□ -1.98
SLX9	YGR081C	SPS4	P09937	338 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	SPS22	P25380	463 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	TIP1	P27654	210 aa	Predicted RBP	2.7	□□□□□ -1.98
SLX9	YGR081C	IDH2	P28241	369 aa	Known RBP	2.7	□□□□□ -1.98
SLX9	YGR081C	ITR1	P30605	584 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	PRP21	P32524	280 aa	Predicted RBP	2.7	□□□□□ -1.98
SLX9	YGR081C	REC114	P32841	428 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	PIM1	P36775	1133 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	YBR137W	P38276	179 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	MTC6	P38849	526 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	UTP9	P38882	575 aa	Known RBP	2.7	□□□□□ -1.98
SLX9	YGR081C	VTC2	P43585	828 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	IRC6	P43615	237 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	NCA3	P46955	337 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	RMD9	P53140	646 aa	Known RBP	2.7	□□□□□ -1.98
SLX9	YGR081C	YLR152C	P54072	576 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	YPR022C	Q12139	1133 aa		2.7	□□□□□ -1.98
SLX9	YGR081C	SOD1	P00445	154 aa	Known RBP	2.69	□□□□□ -1.98
SLX9	YGR081C	PET123	P17558	318 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	HXT3	P32466	567 aa	Known RBP	2.69	□□□□□ -1.98
SLX9	YGR081C	MSG5	P38590	489 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	SMF1	P38925	575 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	ARF3	P40994	183 aa	RIP-Chip data	2.69	□□□□□ -1.98	not detected
SLX9	YGR081C	LAM5	P43560	674 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	YGL039W	P53183	348 aa	Known RBP	2.69	□□□□□ -1.98
SLX9	YGR081C	HXT11	P54862	567 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	SYF1	Q04048	859 aa	Predicted RBP	2.69	□□□□□ -1.98
SLX9	YGR081C	YDR387C	Q04162	555 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	HSP31	Q04432	237 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	MUM3	Q08750	479 aa		2.69	□□□□□ -1.98
SLX9	YGR081C	PKH2	Q12236	1081 aa	Known RBP	2.69	□□□□□ -1.98
SLX9	YGR081C	RIP1	P08067	215 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	MRP7	P12687	371 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	SEC63	P14906	663 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	ROX1	P25042	368 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	APE2	P32454	952 aa	Known RBP	2.68	□□□□□ -1.98
SLX9	YGR081C	RIB5	P38145	238 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	PAN6	P40459	309 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	ECM27	P47144	725 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	DSL1	P53847	754 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	HER2	Q03557	464 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	HRI1	Q05905	244 aa	Known RBP	2.68	□□□□□ -1.98
SLX9	YGR081C	TIM18	Q08749	192 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	FDH1	Q08911	376 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	YPK9	Q12697	1472 aa		2.68	□□□□□ -1.98
SLX9	YGR081C	HIS4	P00815	799 aa	Known RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	TRP1	P00912	224 aa		2.67	□□□□□ -1.98
SLX9	YGR081C	MET17	P06106	444 aa		2.67	□□□□□ -1.98
SLX9	YGR081C	GPH1	P06738	902 aa	Known RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	RPS8A	P0CX39	200 aa	Known RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	RPS8B	P0CX40	200 aa	Known RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	RPI1	P23250	407 aa	Known RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	PPH22	P23595	377 aa		2.67	□□□□□ -1.98
SLX9	YGR081C	DAL2	P25335	343 aa		2.67	□□□□□ -1.98
SLX9	YGR081C	YNR048W	P53740	393 aa		2.67	□□□□□ -1.98
SLX9	YGR081C	RPA49	Q01080	415 aa	Predicted RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	GIR2	Q03768	265 aa	Predicted RBP	2.67	□□□□□ -1.98
SLX9	YGR081C	NUM1	Q00402	2748 aa		2.66	□□□□□ -1.98
SLX9	YGR081C	RPL3	P14126	387 aa	Known RBP	2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms