RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W TY2A-DR3Q99303 438 aa5.24□□□□□ -1.57
SHE10YGL228W YPR096CO13587 100 aa5.23□□□□□ -1.57
SHE10YGL228W MDM35O60200 86 aa5.23□□□□□ -1.57
SHE10YGL228W DAP2P18962 818 aa5.23□□□□□ -1.57
SHE10YGL228W ERG6P25087 383 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W ADE1P27616 306 aa5.23□□□□□ -1.57
SHE10YGL228W PET127P32606 800 aa5.23□□□□□ -1.57
SHE10YGL228W CAT2P32796 670 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W SFC1P33303 322 aa5.23□□□□□ -1.57
SHE10YGL228W DOM34P33309 386 aa5.23□□□□□ -1.57
SHE10YGL228W FMP46P36141 133 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W SKG1P36169 355 aa5.23□□□□□ -1.57
SHE10YGL228W YHR033WP38690 423 aa5.23□□□□□ -1.57
SHE10YGL228W YHR218WP38899 603 aa5.23□□□□□ -1.57
SHE10YGL228W FAA2P39518 744 aa5.23□□□□□ -1.57
SHE10YGL228W LTP1P40347 161 aa5.23□□□□□ -1.57
SHE10YGL228W LAS21P40367 830 aa5.23□□□□□ -1.57
SHE10YGL228W MNT3P40549 630 aa5.23□□□□□ -1.57
SHE10YGL228W YJL049WP47048 450 aa5.23□□□□□ -1.57
SHE10YGL228W RTS3P53289 263 aa5.23□□□□□ -1.57
SHE10YGL228W RHO3Q00245 231 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W MSC1Q03104 513 aa5.23□□□□□ -1.57
SHE10YGL228W HMO1Q03973 246 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W MUS81Q04149 632 aaPredicted RBP5.23□□□□□ -1.57
SHE10YGL228W RRP40Q08285 240 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W ULA1Q12059 462 aa5.23□□□□□ -1.57
SHE10YGL228W YPR064WQ12492 139 aa5.23□□□□□ -1.57
SHE10YGL228W Q0010Q9ZZX9 128 aa5.23□□□□□ -1.57
SHE10YGL228W BCY1P07278 416 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W GCD2P12754 651 aaPredicted RBP5.23□□□□□ -1.57
SHE10YGL228W FUR1P18562 216 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W CDC5P32562 705 aa5.23□□□□□ -1.57
SHE10YGL228W UGP1P32861 499 aaKnown RBP5.23□□□□□ -1.57
SHE10YGL228W SKN1P33336 771 aa5.23□□□□□ -1.57
SHE10YGL228W MUM2P38236 366 aa5.23□□□□□ -1.57
SHE10YGL228W ARF3P40994 183 aaRIP-Chip data5.23□□□□□ -1.57not detected
SHE10YGL228W PRM10P42946 383 aa5.23□□□□□ -1.57
SHE10YGL228W ASI2P53895 289 aa5.23□□□□□ -1.57
SHE10YGL228W SKI8Q02793 397 aaPredicted RBP5.23□□□□□ -1.57
SHE10YGL228W PDR8Q06149 701 aa5.23□□□□□ -1.57
SHE10YGL228W YLL007CQ07799 665 aa5.23□□□□□ -1.57
SHE10YGL228W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
SHE10YGL228W REX4Q08237 289 aa5.23□□□□□ -1.57
SHE10YGL228W NTO1Q12311 748 aa5.23□□□□□ -1.57
SHE10YGL228W RKM5Q12367 367 aa5.23□□□□□ -1.57
SHE10YGL228W HFA1P32874 2273 aa5.22□□□□□ -1.57
SHE10YGL228W TY4B-PA0A0B7P3V8 1104 aa5.22□□□□□ -1.57
SHE10YGL228W RPS17AP02407 136 aaKnown RBP5.22□□□□□ -1.57
SHE10YGL228W CBP2P03874 630 aaPredicted RBP5.22□□□□□ -1.57
SHE10YGL228W LAT1P12695 482 aaKnown RBP5.22□□□□□ -1.57
SHE10YGL228W RPS17BP14127 136 aaKnown RBP5.22□□□□□ -1.57
SHE10YGL228W SNF5P18480 905 aa5.22□□□□□ -1.57
SHE10YGL228W CDC13P32797 924 aaKnown RBP5.22□□□□□ -1.57
SHE10YGL228W UTH1P36135 365 aa5.22□□□□□ -1.57
SHE10YGL228W STP2P38704 541 aa5.22□□□□□ -1.57
SHE10YGL228W MAD2P40958 196 aa5.22□□□□□ -1.57
SHE10YGL228W YJL043WP47053 257 aa5.22□□□□□ -1.57
SHE10YGL228W MRK1P50873 501 aa5.22□□□□□ -1.57
SHE10YGL228W SDT1P53078 280 aa5.22□□□□□ -1.57
SHE10YGL228W EGD1Q02642 157 aaKnown RBP5.22□□□□□ -1.57
SHE10YGL228W GPI11Q06636 219 aa5.22□□□□□ -1.57
SHE10YGL228W GAL7P08431 366 aa5.21□□□□□ -1.58
SHE10YGL228W SPB1P25582 841 aaPredicted RBP5.21□□□□□ -1.58
SHE10YGL228W BUB3P26449 341 aa5.21□□□□□ -1.58
SHE10YGL228W SFA1P32771 386 aa5.21□□□□□ -1.58
SHE10YGL228W BNA4P38169 460 aa5.21□□□□□ -1.58
SHE10YGL228W BEM4P39011 633 aa5.21□□□□□ -1.58
SHE10YGL228W SWD1P39706 426 aa5.21□□□□□ -1.58
SHE10YGL228W CSL4P53859 292 aaPredicted RBP5.21□□□□□ -1.58
SHE10YGL228W SVL3Q03088 825 aaKnown RBP5.21□□□□□ -1.58
SHE10YGL228W UGO1Q03327 502 aa5.21□□□□□ -1.58
SHE10YGL228W MFB1Q04922 465 aa5.21□□□□□ -1.58
SHE10YGL228W RRP45Q05636 305 aaKnown RBP5.21□□□□□ -1.58
SHE10YGL228W ARR1Q06596 294 aa5.21□□□□□ -1.58
SHE10YGL228W PUN1Q06991 263 aa5.21□□□□□ -1.58
SHE10YGL228W GET4Q12125 312 aa5.21□□□□□ -1.58
SHE10YGL228W YOL107WQ12239 342 aa5.21□□□□□ -1.58
SHE10YGL228W PSY3Q12318 242 aa5.21□□□□□ -1.58
SHE10YGL228W YDR262WQ12331 272 aa5.21□□□□□ -1.58
SHE10YGL228W RRP12Q12754 1228 aaKnown RBP5.21□□□□□ -1.58
SHE10YGL228W RAD7P06779 565 aa5.2□□□□□ -1.58
SHE10YGL228W RPL1AP0CX43 217 aaKnown RBP5.2□□□□□ -1.58
SHE10YGL228W RPL1BP0CX44 217 aaKnown RBP5.2□□□□□ -1.58
SHE10YGL228W PEX3P28795 441 aa5.2□□□□□ -1.58
SHE10YGL228W ERG1P32476 496 aaKnown RBP5.2□□□□□ -1.58
SHE10YGL228W SSO1P32867 290 aa5.2□□□□□ -1.58
SHE10YGL228W SWH1P35845 1188 aa5.2□□□□□ -1.58
SHE10YGL228W ASC1P38011 319 aaKnown RBP5.2□□□□□ -1.58
SHE10YGL228W MNN2P38069 597 aa5.2□□□□□ -1.58
SHE10YGL228W SLM4P38247 162 aa5.2□□□□□ -1.58
SHE10YGL228W EHT1P38295 451 aa5.2□□□□□ -1.58
SHE10YGL228W RCK1P38622 512 aa5.2□□□□□ -1.58
SHE10YGL228W YEL020CP39994 560 aa5.2□□□□□ -1.58
SHE10YGL228W PAC11P40960 533 aa5.2□□□□□ -1.58
SHE10YGL228W RAD17P48581 401 aa5.2□□□□□ -1.58
SHE10YGL228W RMR1P53060 241 aa5.2□□□□□ -1.58
SHE10YGL228W ROG1P53118 685 aa5.2□□□□□ -1.58
SHE10YGL228W GOR1P53839 350 aa5.2□□□□□ -1.58
SHE10YGL228W YNL095CP53932 642 aa5.2□□□□□ -1.58
SHE10YGL228W SPR6Q01684 191 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms