RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W TRS130Q03660 1102 aa3.18□□□□□ -1.9
USE1YGL098W YML037CQ03703 340 aa3.18□□□□□ -1.9
USE1YGL098W MDM30Q05930 598 aa3.18□□□□□ -1.9
USE1YGL098W ADY4Q05955 493 aa3.18□□□□□ -1.9
USE1YGL098W ARO10Q06408 635 aa3.18□□□□□ -1.9
USE1YGL098W IRC3Q06683 689 aa3.18□□□□□ -1.9
USE1YGL098W SAM4Q08985 325 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W YOR283WQ12040 230 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W PUS9Q12069 462 aa3.18□□□□□ -1.9
USE1YGL098W RBD2Q12270 262 aa3.18□□□□□ -1.9
USE1YGL098W YOR012WQ12351 137 aa3.18□□□□□ -1.9
USE1YGL098W ENA5Q12691 1091 aa3.18□□□□□ -1.9
USE1YGL098W MHF1Q3E835 90 aa3.18□□□□□ -1.9
USE1YGL098W AFI1Q99222 893 aa3.18□□□□□ -1.9
USE1YGL098W SAS5Q99314 248 aa3.18□□□□□ -1.9
USE1YGL098W MPD2Q99316 277 aa3.18□□□□□ -1.9
USE1YGL098W STE2D6VTK4 431 aa3.17□□□□□ -1.9
USE1YGL098W TDH1P00360 332 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W CDC28P00546 298 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W BI2P03873 423 aa3.17□□□□□ -1.9
USE1YGL098W PMA1P05030 918 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W RAD7P06779 565 aa3.17□□□□□ -1.9
USE1YGL098W MET2P08465 486 aa3.17□□□□□ -1.9
USE1YGL098W PCK1P10963 549 aa3.17□□□□□ -1.9
USE1YGL098W IDI1P15496 288 aa3.17□□□□□ -1.9
USE1YGL098W APA1P16550 321 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W AAC3P18238 307 aa3.17□□□□□ -1.9
USE1YGL098W FUR1P18562 216 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W MRPL44P19956 98 aa3.17□□□□□ -1.9
USE1YGL098W RPB10P22139 70 aa3.17□□□□□ -1.9
USE1YGL098W SAT4P25333 603 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W RNQ1P25367 405 aa3.17□□□□□ -1.9
USE1YGL098W MGR1P25573 417 aa3.17□□□□□ -1.9
USE1YGL098W PPZ1P26570 692 aa3.17□□□□□ -1.9
USE1YGL098W HEM12P32347 362 aaPredicted RBP3.17□□□□□ -1.9
USE1YGL098W GSH1P32477 678 aa3.17□□□□□ -1.9
USE1YGL098W FRE1P32791 686 aa3.17□□□□□ -1.9
USE1YGL098W CDC13P32797 924 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W ORC2P32833 620 aa3.17□□□□□ -1.9
USE1YGL098W UGA4P32837 571 aa3.17□□□□□ -1.9
USE1YGL098W PDC2P32896 925 aa3.17□□□□□ -1.9
USE1YGL098W SPO23P33757 523 aa3.17□□□□□ -1.9
USE1YGL098W ELF1P36053 145 aa3.17□□□□□ -1.9
USE1YGL098W MRPL37P36532 105 aa3.17□□□□□ -1.9
USE1YGL098W ECM8P38246 354 aa3.17□□□□□ -1.9
USE1YGL098W ERV15P38312 142 aa3.17□□□□□ -1.9
USE1YGL098W PHO89P38361 574 aa3.17□□□□□ -1.9
USE1YGL098W KSP1P38691 1029 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W GND1P38720 489 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W ARN1P38731 627 aa3.17□□□□□ -1.9
USE1YGL098W HSE1P38753 452 aa3.17□□□□□ -1.9
USE1YGL098W QNS1P38795 714 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W YHR131CP38835 850 aa3.17□□□□□ -1.9
USE1YGL098W SOP4P39543 234 aaPredicted RBP3.17□□□□□ -1.9
USE1YGL098W RBG1P39729 369 aa3.17□□□□□ -1.9
USE1YGL098W PIG2P40187 538 aa3.17□□□□□ -1.9
USE1YGL098W YMR144WP40214 342 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W PGD1P40356 397 aa3.17□□□□□ -1.9
USE1YGL098W YIL054WP40524 105 aa3.17□□□□□ -1.9
USE1YGL098W YIR035CP40579 254 aa3.17□□□□□ -1.9
USE1YGL098W GNA1P43577 159 aaPredicted RBP3.17□□□□□ -1.9
USE1YGL098W IDS2P46958 469 aa3.17□□□□□ -1.9
USE1YGL098W TIM54P47045 478 aa3.17□□□□□ -1.9
USE1YGL098W YJL043WP47053 257 aa3.17□□□□□ -1.9
USE1YGL098W PAC10P48363 199 aa3.17□□□□□ -1.9
USE1YGL098W NBP1P52919 319 aaPredicted RBP3.17□□□□□ -1.9
USE1YGL098W DOC1P53068 250 aa3.17□□□□□ -1.9
USE1YGL098W AIM14P53109 570 aa3.17□□□□□ -1.9
USE1YGL098W YBP2P53169 641 aa3.17□□□□□ -1.9
USE1YGL098W ERV14P53173 138 aa3.17□□□□□ -1.9
USE1YGL098W RSM27P53305 110 aa3.17□□□□□ -1.9
USE1YGL098W DSE4P53753 1117 aa3.17□□□□□ -1.9
USE1YGL098W YNL146WP53906 100 aa3.17□□□□□ -1.9
USE1YGL098W YAT1P80235 687 aa3.17□□□□□ -1.9
USE1YGL098W ECM9Q02202 377 aa3.17□□□□□ -1.9
USE1YGL098W NUP116Q02630 1113 aa3.17□□□□□ -1.9
USE1YGL098W UBP16Q02863 499 aa3.17□□□□□ -1.9
USE1YGL098W YPL071CQ02864 156 aa3.17□□□□□ -1.9
USE1YGL098W RMT2Q03305 412 aa3.17□□□□□ -1.9
USE1YGL098W HAS1Q03532 505 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W RUB1Q03919 77 aa3.17□□□□□ -1.9
USE1YGL098W SND1Q04007 877 aa3.17□□□□□ -1.9
USE1YGL098W PEX12Q04370 399 aa3.17□□□□□ -1.9
USE1YGL098W MYO5Q04439 1219 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W BCH1Q05029 724 aa3.17□□□□□ -1.9
USE1YGL098W VID22Q05934 901 aa3.17□□□□□ -1.9
USE1YGL098W YLR224WQ05947 369 aa3.17□□□□□ -1.9
USE1YGL098W UTP21Q06078 939 aaPredicted RBP3.17□□□□□ -1.9
USE1YGL098W YDL086WQ07505 273 aa3.17□□□□□ -1.9
USE1YGL098W REX3Q12090 404 aa3.17□□□□□ -1.9
USE1YGL098W FAL1Q12099 399 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W LYS21Q12122 440 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W YLL058WQ12198 575 aa3.17□□□□□ -1.9
USE1YGL098W PAA1Q12447 191 aaKnown RBP3.17□□□□□ -1.9
USE1YGL098W YOL159C-AQ3E769 90 aa3.17□□□□□ -1.9
USE1YGL098W FRT1Q99332 602 aa3.17□□□□□ -1.9
USE1YGL098W COBP00163 385 aa3.16□□□□□ -1.9
USE1YGL098W LEU4P06208 619 aaKnown RBP3.16□□□□□ -1.9
USE1YGL098W BAR1P12630 587 aa3.16□□□□□ -1.9
USE1YGL098W FUS3P16892 353 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms