RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	SSN8	P47821	323 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	VMA10	P48836	114 aa	Known RBP	4.08	□□□□□ -1.76
YGL088W	YGL088W	KAP114	P53067	1004 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	SGF73	P53165	657 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	DRN1	P53255	507 aa	Known RBP	4.08	□□□□□ -1.76
YGL088W	YGL088W	IPI3	P53877	555 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	RHO3	Q00245	231 aa	Known RBP	4.08	□□□□□ -1.76
YGL088W	YGL088W	YPL109C	Q02981	657 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	RLI1	Q03195	608 aa	Known RBP	4.08	□□□□□ -1.76
YGL088W	YGL088W	URC2	Q04411	772 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	VHS3	Q08438	674 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	AKR2	Q12013	749 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	LEU9	Q12166	604 aa	Known RBP	4.08	□□□□□ -1.76
YGL088W	YGL088W	RTN2	Q12443	393 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	MDM12	Q92328	271 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	ECM3	Q99252	613 aa		4.08	□□□□□ -1.76
YGL088W	YGL088W	CDC36	P06100	191 aa	Predicted RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	PRP16	P15938	1071 aa	Predicted RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	YCR016W	P25617	290 aa	Known RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	ERG1	P32476	496 aa	Known RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	PRP19	P32523	503 aa	Known RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	RPT5	P33297	434 aa	Known RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	YKR015C	P36111	568 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	VPS51	P36116	164 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	MAL32	P38158	584 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	BIT2	P38346	545 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YHR182W	P38870	785 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	ZRG8	P40021	1076 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	PAN6	P40459	309 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	SMK1	P41808	388 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	SIP4	P46954	829 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	CPR7	P47103	393 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YJR096W	P47137	282 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	RMR1	P53060	241 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	TAD1	P53065	400 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YGR012W	P53206	393 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	VPS60	Q03390	229 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	EMI1	Q04406	187 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	GTB1	Q04924	702 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	BSC2	Q05611	235 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	TPO1	Q07824	586 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	PML1	Q07930	204 aa	Predicted RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	YTM1	Q12024	460 aa	Predicted RBP	4.07	□□□□□ -1.76
YGL088W	YGL088W	TGL5	Q12043	749 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	ATG29	Q12092	213 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YDL109C	Q12103	647 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	ACF2	Q12168	779 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YLR122C	Q12312	125 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YOL114C	Q12322	202 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	LDB17	Q12342	491 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	RMP1	Q12530	201 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	YOR338W	Q99326	363 aa		4.07	□□□□□ -1.76
YGL088W	YGL088W	ARG3	P05150	338 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	GPA1	P08539	472 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	GLN4	P13188	809 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	DPB2	P24482	689 aa	Predicted RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	GID7	P25569	745 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	DAL3	P32459	195 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	HXT1	P32465	570 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	SUA5	P32579	426 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	SRP101	P32916	621 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	SRB2	P34162	210 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	CPR5	P35176	225 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	YKL063C	P35725	167 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	TPO5	P36029	618 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	CHK1	P38147	527 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	KAP104	P38217	918 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	LIN1	P38852	340 aa	Predicted RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	SUR2	P38992	349 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	FLC2	P39719	783 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	YER130C	P39959	443 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	EDC3	P39998	551 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	MRX1	P40050	688 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	LRO1	P40345	661 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	CCT5	P40413	562 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	MSS2	P40990	351 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	LOH1	P47055	219 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	SUT1	P53032	299 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	PDR16	P53860	351 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	SAM50	P53969	484 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	CDC55	Q00362	526 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	YSA1	Q01976	231 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	RSN1	Q03516	953 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	SHE9	Q04172	456 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	GIM5	Q04493	163 aa		4.06	□□□□□ -1.76
YGL088W	YGL088W	DIS3	Q08162	1001 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	CHS5	Q12114	671 aa	Known RBP	4.06	□□□□□ -1.76
YGL088W	YGL088W	HXK2	P04807	486 aa	Known RBP	4.05	□□□□□ -1.76
YGL088W	YGL088W	MET3	P08536	511 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	YML002W	P0CF17	737 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	SCH9	P11792	824 aa	Known RBP	4.05	□□□□□ -1.76
YGL088W	YGL088W	YAK1	P14680	807 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	OLE1	P21147	510 aa	Known RBP	4.05	□□□□□ -1.76
YGL088W	YGL088W	AGP1	P25376	633 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	VPH2	P32341	215 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	COQ2	P32378	372 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	KAR9	P32526	644 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	HCS1	P34243	683 aa		4.05	□□□□□ -1.76
YGL088W	YGL088W	RRP1	P35178	278 aa	Predicted RBP	4.05	□□□□□ -1.76
YGL088W	YGL088W	GLG1	P36143	616 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 507.1 ms