RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	TOM71	P38825	639 aa	Known RBP	4.86	□□□□□ -1.63
SNM1	YDR478W	MNL1	P38888	796 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	STN1	P38960	494 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	YDR089W	P38966	869 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	RTT105	P40063	208 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	YPT11	P48559	417 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	NUP100	Q02629	959 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	DIC1	Q06143	298 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	PHO92	Q06390	306 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	BUG1	Q12191	341 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	ARP6	Q12509	438 aa		4.86	□□□□□ -1.63
SNM1	YDR478W	GAL4	P04386	881 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	SCH9	P11792	824 aa	Known RBP	4.85	□□□□□ -1.63
SNM1	YDR478W	YCR007C	P25354	239 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	GID7	P25569	745 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	RDS1	P25611	832 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	YBL028C	P38202	106 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	RRP4	P38792	359 aa	Known RBP	4.85	□□□□□ -1.63
SNM1	YDR478W	FAU1	P40099	211 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	GAT2	P40209	560 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	SAS2	P40963	338 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	IAH1	P41734	238 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	PHO86	P46956	311 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	YIF1	P53845	314 aa	Known RBP	4.85	□□□□□ -1.63
SNM1	YDR478W	YNL181W	P53878	407 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	LGE1	Q02796	332 aa	Known RBP	4.85	□□□□□ -1.63
SNM1	YDR478W	YDR387C	Q04162	555 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	ECI1	Q05871	280 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	OSW1	Q08692	278 aa		4.85	□□□□□ -1.63
SNM1	YDR478W	COX3	P00420	269 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	HIS4	P00815	799 aa	Known RBP	4.84	□□□□□ -1.63
SNM1	YDR478W	CDC21	P06785	304 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	GRR1	P24814	1151 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	RPS2	P25443	254 aa	Known RBP	4.84	□□□□□ -1.63
SNM1	YDR478W	NIP1	P32497	812 aa	Known RBP	4.84	□□□□□ -1.63
SNM1	YDR478W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SNM1	YDR478W	SCO2	P38072	301 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	EFM3	P47163	339 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	BRO1	P48582	844 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	YGL082W	P53155	381 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	ERV25	P54837	211 aa	Known RBP	4.84	□□□□□ -1.63
SNM1	YDR478W	ERG13	P54839	491 aa	Known RBP	4.84	□□□□□ -1.63
SNM1	YDR478W	TAF12	Q03761	539 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	EKI1	Q03764	534 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	IPK1	Q06667	281 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	NSE1	Q07913	336 aa		4.84	□□□□□ -1.63
SNM1	YDR478W	LSP1	Q12230	341 aa	Known RBP	4.84	□□□□□ -1.63
SNM1	YDR478W	STE3	P06783	470 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	HOM2	P13663	365 aa	Known RBP	4.83	□□□□□ -1.64
SNM1	YDR478W	EXO70	P19658	623 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	ERG7	P38604	731 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	LEU5	P38702	357 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	INM1	P38710	295 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	SPC97	P38863	823 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	GPI16	P38875	610 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	PAC11	P40960	533 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	TRS85	P46944	698 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	RRP46	P53256	223 aa	Predicted RBP	4.83	□□□□□ -1.64
SNM1	YDR478W	UTP6	Q02354	440 aa	Known RBP	4.83	□□□□□ -1.64
SNM1	YDR478W	GIP3	Q03016	1276 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	RSC9	Q03124	581 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	REX4	Q08237	289 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	YLL056C	Q12177	298 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	FRE7	Q12333	620 aa		4.83	□□□□□ -1.64
SNM1	YDR478W	TUB1	P09733	447 aa	Known RBP	4.82	□□□□□ -1.64
SNM1	YDR478W	NFT1	P0CE68	1218 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	RAD57	P25301	460 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	SMY1	P32364	656 aa	Known RBP	4.82	□□□□□ -1.64
SNM1	YDR478W	CYS4	P32582	507 aa	Known RBP	4.82	□□□□□ -1.64
SNM1	YDR478W	YNK1	P36010	153 aa	Known RBP	4.82	□□□□□ -1.64
SNM1	YDR478W	EBP2	P36049	427 aa	Known RBP	4.82	□□□□□ -1.64
SNM1	YDR478W	YPK3	P38070	525 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	MSG5	P38590	489 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	RTS2	P40962	232 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SNM1	YDR478W	MPS2	P53159	387 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	SLD5	Q03406	294 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	MSS11	Q03825	758 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	YMR111C	Q04461	462 aa	Predicted RBP	4.82	□□□□□ -1.64
SNM1	YDR478W	MRPL1	Q04599	285 aa		4.82	□□□□□ -1.64
SNM1	YDR478W	HNM1	P19807	563 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	MBR1	P23493	339 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	PPZ1	P26570	692 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	YSC83	P32792	385 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	VPS17	P32913	551 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	PDR3	P33200	976 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	RIB7	P33312	244 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	QDR3	P38227	689 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	RRP3	P38712	501 aa	Known RBP	4.81	□□□□□ -1.64
SNM1	YDR478W	CSM2	P40465	213 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	CFD1	P40558	293 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	IZH1	Q03419	316 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	NRT1	Q08485	598 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	YLR112W	Q12130	139 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	NDJ1	Q12366	352 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	RAD61	Q99359	647 aa		4.81	□□□□□ -1.64
SNM1	YDR478W	YAP1	P19880	650 aa	Known RBP	4.8	□□□□□ -1.64
SNM1	YDR478W	MGR1	P25573	417 aa		4.8	□□□□□ -1.64
SNM1	YDR478W	BUB3	P26449	341 aa		4.8	□□□□□ -1.64
SNM1	YDR478W	MIC60	P36112	540 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms