RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W ATG9Q12142 997 aa2.3□□□□□ -2.04
SDC1YDR469W CHD1P32657 1468 aa2.3□□□□□ -2.04
SDC1YDR469W SAC3P46674 1301 aa2.29□□□□□ -2.04
SDC1YDR469W STE2D6VTK4 431 aa2.29□□□□□ -2.04
SDC1YDR469W VPS63O13549 108 aa2.29□□□□□ -2.04
SDC1YDR469W ARG81P05085 880 aa2.29□□□□□ -2.04
SDC1YDR469W ILV5P06168 395 aaKnown RBP2.29□□□□□ -2.04
SDC1YDR469W PET111P08468 800 aa2.29□□□□□ -2.04
SDC1YDR469W SPS4P09937 338 aa2.29□□□□□ -2.04
SDC1YDR469W RPL31BP0C2H9 113 aaKnown RBP2.29□□□□□ -2.04
SDC1YDR469W PCT1P13259 424 aa2.29□□□□□ -2.04
SDC1YDR469W CBS2P14905 389 aa2.29□□□□□ -2.04
SDC1YDR469W UBA1P22515 1024 aaKnown RBP2.29□□□□□ -2.04
SDC1YDR469W BOS1P25385 244 aa2.29□□□□□ -2.04
SDC1YDR469W MGR1P25573 417 aa2.29□□□□□ -2.04
SDC1YDR469W RAD14P28519 371 aa2.29□□□□□ -2.04
SDC1YDR469W BEM1P29366 551 aa2.29□□□□□ -2.04
SDC1YDR469W SPC110P32380 944 aa2.29□□□□□ -2.04
SDC1YDR469W RIM1P32445 135 aaKnown RBP2.29□□□□□ -2.04
SDC1YDR469W HIR2P32480 875 aa2.29□□□□□ -2.04
SDC1YDR469W PTK1P36002 662 aaPredicted RBP2.29□□□□□ -2.04
SDC1YDR469W RPL32P38061 130 aaKnown RBP2.29□□□□□ -2.04
SDC1YDR469W ANS1P38832 159 aa2.29□□□□□ -2.04
SDC1YDR469W MNL1P38888 796 aa2.29□□□□□ -2.04
SDC1YDR469W MLH1P38920 769 aa2.29□□□□□ -2.04
SDC1YDR469W SMC2P38989 1170 aaKnown RBP2.29□□□□□ -2.04
SDC1YDR469W GCD10P41814 478 aa2.29□□□□□ -2.04
SDC1YDR469W URB2P47108 1174 aa2.29□□□□□ -2.04
SDC1YDR469W ECM27P47144 725 aa2.29□□□□□ -2.04
SDC1YDR469W NUP84P52891 726 aa2.29□□□□□ -2.04
SDC1YDR469W YGR266WP53326 701 aa2.29□□□□□ -2.04
SDC1YDR469W IST1P53843 298 aaPredicted RBP2.29□□□□□ -2.04
SDC1YDR469W YMR160WQ03823 816 aa2.29□□□□□ -2.04
SDC1YDR469W ARV1Q06541 321 aa2.29□□□□□ -2.04
SDC1YDR469W YDL057WQ07379 328 aa2.29□□□□□ -2.04
SDC1YDR469W RRT8Q08219 342 aa2.29□□□□□ -2.04
SDC1YDR469W VAM3Q12241 283 aa2.29□□□□□ -2.04
SDC1YDR469W MTR10Q99189 972 aa2.29□□□□□ -2.04
SDC1YDR469W CAR1P00812 333 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W CBP2P03874 630 aaPredicted RBP2.28□□□□□ -2.04
SDC1YDR469W CDC42P19073 191 aa2.28□□□□□ -2.04
SDC1YDR469W ELO2P25358 347 aa2.28□□□□□ -2.04
SDC1YDR469W FAA1P30624 700 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W MCM4P30665 933 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W SNU114P36048 1008 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W NUP133P36161 1157 aa2.28□□□□□ -2.04
SDC1YDR469W MRPL37P36532 105 aa2.28□□□□□ -2.04
SDC1YDR469W HSM3P38348 480 aa2.28□□□□□ -2.04
SDC1YDR469W DBP8P38719 431 aa2.28□□□□□ -2.04
SDC1YDR469W UIP3P39547 235 aa2.28□□□□□ -2.04
SDC1YDR469W RPA34P47006 233 aaPredicted RBP2.28□□□□□ -2.04
SDC1YDR469W YHC3P47040 408 aa2.28□□□□□ -2.04
SDC1YDR469W AIM22P47051 409 aa2.28□□□□□ -2.04
SDC1YDR469W ROG1P53118 685 aa2.28□□□□□ -2.04
SDC1YDR469W MPS2P53159 387 aa2.28□□□□□ -2.04
SDC1YDR469W PNC1P53184 216 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W PIB2P53191 635 aa2.28□□□□□ -2.04
SDC1YDR469W RPN14P53196 417 aa2.28□□□□□ -2.04
SDC1YDR469W KTR5P53966 522 aaPredicted RBP2.28□□□□□ -2.04
SDC1YDR469W YVH1Q02256 364 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W EGD1Q02642 157 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W PFA5Q03289 374 aa2.28□□□□□ -2.04
SDC1YDR469W CWC21Q03375 135 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W EMI2Q04409 500 aaKnown RBP2.28□□□□□ -2.04
SDC1YDR469W ECM18Q04623 453 aa2.28□□□□□ -2.04
SDC1YDR469W YPR172WQ06608 200 aa2.28□□□□□ -2.04
SDC1YDR469W YFH1Q07540 174 aa2.28□□□□□ -2.04
SDC1YDR469W NBL1Q3E7Y6 73 aa2.28□□□□□ -2.04
SDC1YDR469W YIL002W-AQ3E7Z5 69 aa2.28□□□□□ -2.04
SDC1YDR469W RAV1P47104 1357 aa2.27□□□□□ -2.05
SDC1YDR469W COR1P07256 457 aa2.27□□□□□ -2.05
SDC1YDR469W GCD2P12754 651 aaPredicted RBP2.27□□□□□ -2.05
SDC1YDR469W UNG1P12887 359 aa2.27□□□□□ -2.05
SDC1YDR469W PMR1P13586 950 aa2.27□□□□□ -2.05
SDC1YDR469W YCR006CP25350 157 aa2.27□□□□□ -2.05
SDC1YDR469W NDI1P32340 513 aa2.27□□□□□ -2.05
SDC1YDR469W TRS65P32893 560 aa2.27□□□□□ -2.05
SDC1YDR469W MRP4P32902 394 aa2.27□□□□□ -2.05
SDC1YDR469W VHC1P38329 1120 aa2.27□□□□□ -2.05
SDC1YDR469W MSG5P38590 489 aa2.27□□□□□ -2.05
SDC1YDR469W CTM1P38818 585 aa2.27□□□□□ -2.05
SDC1YDR469W SPT8P38915 602 aa2.27□□□□□ -2.05
SDC1YDR469W BFR1P38934 470 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SDC1YDR469W END3P39013 349 aa2.27□□□□□ -2.05
SDC1YDR469W MNN9P39107 395 aaKnown RBP2.27□□□□□ -2.05
SDC1YDR469W SSO2P39926 295 aa2.27□□□□□ -2.05
SDC1YDR469W VHS2P40463 436 aa2.27□□□□□ -2.05
SDC1YDR469W YGL108CP53139 140 aa2.27□□□□□ -2.05
SDC1YDR469W LSB1P53281 241 aa2.27□□□□□ -2.05
SDC1YDR469W RSM23Q01163 450 aa2.27□□□□□ -2.05
SDC1YDR469W UTP6Q02354 440 aaKnown RBP2.27□□□□□ -2.05
SDC1YDR469W VPS20Q04272 221 aa2.27□□□□□ -2.05
SDC1YDR469W TAP42Q04372 366 aa2.27□□□□□ -2.05
SDC1YDR469W KAP95Q06142 861 aaKnown RBP2.27□□□□□ -2.05
SDC1YDR469W RTT109Q07794 436 aa2.27□□□□□ -2.05
SDC1YDR469W TY3A-GQ12173 290 aa2.27□□□□□ -2.05
SDC1YDR469W YOR012WQ12351 137 aa2.27□□□□□ -2.05
SDC1YDR469W TY3A-IQ99219 290 aa2.27□□□□□ -2.05
SDC1YDR469W TDH1P00360 332 aaKnown RBP2.26□□□□□ -2.05
SDC1YDR469W LEU4P06208 619 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms