RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C RPL24AP04449 155 aaKnown RBP2.55□□□□□ -2
SSN2YDR443C YML003WP0CF16 290 aa2.55□□□□□ -2
SSN2YDR443C COQ1P18900 473 aa2.55□□□□□ -2
SSN2YDR443C NAR1P23503 491 aaKnown RBP2.55□□□□□ -2
SSN2YDR443C ECM25P32525 599 aa2.55□□□□□ -2
SSN2YDR443C ECT1P33412 323 aa2.55□□□□□ -2
SSN2YDR443C NNK1P36003 928 aa2.55□□□□□ -2
SSN2YDR443C ARA1P38115 344 aa2.55□□□□□ -2
SSN2YDR443C YHR112CP38716 378 aa2.55□□□□□ -2
SSN2YDR443C MSS4P38994 779 aa2.55□□□□□ -2
SSN2YDR443C DSE1P40077 573 aa2.55□□□□□ -2
SSN2YDR443C DPB11P47027 764 aaPredicted RBP2.55□□□□□ -2
SSN2YDR443C YGR079WP53249 370 aa2.55□□□□□ -2
SSN2YDR443C USA1Q03714 838 aa2.55□□□□□ -2
SSN2YDR443C RTT103Q05543 409 aa2.55□□□□□ -2
SSN2YDR443C VPS74Q06385 345 aa2.55□□□□□ -2
SSN2YDR443C YOR223WQ12015 292 aa2.55□□□□□ -2
SSN2YDR443C NHP6BP11633 99 aaKnown RBP2.55□□□□□ -2
SSN2YDR443C MSB1P21339 1137 aaKnown RBP2.55□□□□□ -2
SSN2YDR443C HIR2P32480 875 aa2.55□□□□□ -2
SSN2YDR443C MAE1P36013 669 aaKnown RBP2.55□□□□□ -2
SSN2YDR443C IMD2P38697 523 aaKnown RBP2.55□□□□□ -2
SSN2YDR443C YHR210CP38893 341 aa2.55□□□□□ -2
SSN2YDR443C PIG2P40187 538 aa2.55□□□□□ -2
SSN2YDR443C SAD1P43589 448 aa2.55□□□□□ -2
SSN2YDR443C STB2P46679 850 aa2.55□□□□□ -2
SSN2YDR443C URB2P47108 1174 aa2.55□□□□□ -2
SSN2YDR443C HED1Q03937 162 aa2.55□□□□□ -2
SSN2YDR443C GMC2Q06201 188 aa2.55□□□□□ -2
SSN2YDR443C YOR389WQ08912 624 aa2.55□□□□□ -2
SSN2YDR443C SLP1Q12232 587 aa2.55□□□□□ -2
SSN2YDR443C DCP1Q12517 231 aaPredicted RBP2.55□□□□□ -2
SSN2YDR443C RNR2P09938 399 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C PMR1P13586 950 aa2.54□□□□□ -2
SSN2YDR443C SAC7P17121 654 aa2.54□□□□□ -2
SSN2YDR443C HXT2P23585 541 aa2.54□□□□□ -2
SSN2YDR443C MSS51P32335 436 aa2.54□□□□□ -2
SSN2YDR443C GSH1P32477 678 aa2.54□□□□□ -2
SSN2YDR443C ASH1P34233 588 aa2.54□□□□□ -2
SSN2YDR443C PLB1P39105 664 aa2.54□□□□□ -2
SSN2YDR443C FMC1P40491 155 aa2.54□□□□□ -2
SSN2YDR443C COS5P47187 383 aa2.54□□□□□ -2
SSN2YDR443C BOP3P53958 396 aa2.54□□□□□ -2
SSN2YDR443C PRM15Q03262 622 aa2.54□□□□□ -2
SSN2YDR443C YPR078CQ06813 372 aa2.54□□□□□ -2
SSN2YDR443C COS7Q07788 383 aa2.54□□□□□ -2
SSN2YDR443C YPL272CQ08984 517 aa2.54□□□□□ -2
SSN2YDR443C YDL176WQ12027 708 aa2.54□□□□□ -2
SSN2YDR443C PUS9Q12069 462 aa2.54□□□□□ -2
SSN2YDR443C VAM3Q12241 283 aa2.54□□□□□ -2
SSN2YDR443C LAG2Q92325 660 aa2.54□□□□□ -2
SSN2YDR443C CBT1P36038 271 aaPredicted RBP2.54□□□□□ -2
SSN2YDR443C MRPL10P36520 322 aa2.54□□□□□ -2
SSN2YDR443C YMR262WP38430 313 aa2.54□□□□□ -2
SSN2YDR443C FET3P38993 636 aa2.54□□□□□ -2
SSN2YDR443C HST3P53687 447 aa2.54□□□□□ -2
SSN2YDR443C NOP13P53883 403 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SSN2YDR443C ZPS1Q12512 249 aa2.54□□□□□ -2
SSN2YDR443C MTR10Q99189 972 aa2.54□□□□□ -2
SSN2YDR443C RHO1P06780 209 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C POL30P15873 258 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C FPS1P23900 669 aa2.54□□□□□ -2
SSN2YDR443C KIN82P25341 720 aa2.54□□□□□ -2
SSN2YDR443C DSS4P32601 143 aa2.54□□□□□ -2
SSN2YDR443C LDB7P38210 180 aa2.54□□□□□ -2
SSN2YDR443C MTW1P39731 289 aa2.54□□□□□ -2
SSN2YDR443C SDP1P40479 209 aa2.54□□□□□ -2
SSN2YDR443C IMO32P53219 342 aa2.54□□□□□ -2
SSN2YDR443C ARG5,6Q01217 863 aa2.54□□□□□ -2
SSN2YDR443C FMP30Q02883 468 aa2.54□□□□□ -2
SSN2YDR443C YMR310CQ04867 317 aaPredicted RBP2.54□□□□□ -2
SSN2YDR443C RRD2Q12461 358 aa2.54□□□□□ -2
SSN2YDR443C SIR4P11978 1358 aa2.54□□□□□ -2
SSN2YDR443C TDH2P00358 332 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C TDH3P00359 332 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SSN2YDR443C SPE2P21182 396 aa2.54□□□□□ -2
SSN2YDR443C UTR1P21373 530 aa2.54□□□□□ -2
SSN2YDR443C CMK2P22517 447 aa2.54□□□□□ -2
SSN2YDR443C BMH1P29311 267 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C DEP1P31385 405 aa2.54□□□□□ -2
SSN2YDR443C SEC66P33754 206 aa2.54□□□□□ -2
SSN2YDR443C RSM22P36056 628 aa2.54□□□□□ -2
SSN2YDR443C MRPL7P36519 292 aa2.54□□□□□ -2
SSN2YDR443C LNP1P38878 278 aa2.54□□□□□ -2
SSN2YDR443C VHS2P40463 436 aa2.54□□□□□ -2
SSN2YDR443C STB4P50104 949 aa2.54□□□□□ -2
SSN2YDR443C LSC2P53312 427 aa2.54□□□□□ -2
SSN2YDR443C TY1A-DR2Q03964 440 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C THI7Q05998 598 aa2.54□□□□□ -2
SSN2YDR443C RTT109Q07794 436 aa2.54□□□□□ -2
SSN2YDR443C SMC5Q08204 1093 aa2.54□□□□□ -2
SSN2YDR443C PAA1Q12447 191 aaKnown RBP2.54□□□□□ -2
SSN2YDR443C YDL007C-AQ2V2Q0 85 aa2.54□□□□□ -2
SSN2YDR443C TOM1Q03280 3268 aa2.53□□□□□ -2
SSN2YDR443C YMR085WP0CF18 432 aa2.53□□□□□ -2
SSN2YDR443C RPL18AP0CX49 186 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C RPL18BP0CX50 186 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C RPS16AP0CX51 143 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C RPS16BP0CX52 143 aaKnown RBP2.53□□□□□ -2
SSN2YDR443C ALG1P16661 449 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms