RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W NOP6Q07623 225 aaKnown RBP4.36□□□□□ -1.71
SPT3YDR392W ADE5,7P07244 802 aaKnown RBP4.35□□□□□ -1.71
SPT3YDR392W MSS116P15424 664 aaKnown RBP4.35□□□□□ -1.71
SPT3YDR392W CRM1P30822 1084 aaKnown RBP4.35□□□□□ -1.71
SPT3YDR392W STO1P34160 861 aaKnown RBP4.35□□□□□ -1.71
SPT3YDR392W LSM5P40089 93 aaKnown RBP4.35□□□□□ -1.71
SPT3YDR392W YIL067CP40514 678 aa4.35□□□□□ -1.71
SPT3YDR392W MPS1P54199 764 aa4.35□□□□□ -1.71
SPT3YDR392W UBX4P54730 416 aa4.35□□□□□ -1.71
SPT3YDR392W RGC1Q06108 1083 aaKnown RBP4.35□□□□□ -1.71
SPT3YDR392W AFI1Q99222 893 aa4.35□□□□□ -1.71
SPT3YDR392W ARN2P38724 620 aa4.34□□□□□ -1.71
SPT3YDR392W BZZ1P38822 633 aa4.34□□□□□ -1.71
SPT3YDR392W SEN34P39707 275 aa4.34□□□□□ -1.71
SPT3YDR392W PIG2P40187 538 aa4.34□□□□□ -1.71
SPT3YDR392W MNN5P46982 586 aa4.34□□□□□ -1.71
SPT3YDR392W NOP9P47077 666 aaKnown RBP4.34□□□□□ -1.71
SPT3YDR392W YGR250CP53316 781 aaKnown RBP4.34□□□□□ -1.71
SPT3YDR392W ECM9Q02202 377 aa4.34□□□□□ -1.71
SPT3YDR392W YLR036CQ07986 203 aa4.34□□□□□ -1.71
SPT3YDR392W GEP3Q08622 556 aa4.34□□□□□ -1.71
SPT3YDR392W Q0142Q9ZZW4 58 aa4.34□□□□□ -1.71
SPT3YDR392W ARG4P04076 463 aaPredicted RBP4.33□□□□□ -1.72
SPT3YDR392W MET2P08465 486 aa4.33□□□□□ -1.72
SPT3YDR392W RPB2P08518 1224 aaKnown RBP4.33□□□□□ -1.72
SPT3YDR392W GFD2P25370 566 aaKnown RBP4.33□□□□□ -1.72
SPT3YDR392W BIT2P38346 545 aa4.33□□□□□ -1.72
SPT3YDR392W GIM4P40005 111 aaKnown RBP4.33□□□□□ -1.72
SPT3YDR392W CAF16P43569 289 aa4.33□□□□□ -1.72
SPT3YDR392W HOC1P47124 396 aa4.33□□□□□ -1.72
SPT3YDR392W EIS1Q05050 843 aaKnown RBP4.33□□□□□ -1.72
SPT3YDR392W PSY3Q12318 242 aa4.33□□□□□ -1.72
SPT3YDR392W MED1Q12321 566 aa4.33□□□□□ -1.72
SPT3YDR392W YGR035W-AQ45U48 73 aa4.33□□□□□ -1.72
SPT3YDR392W MEI5P32489 222 aa4.32□□□□□ -1.72
SPT3YDR392W SRB2P34162 210 aa4.32□□□□□ -1.72
SPT3YDR392W PMC1P38929 1173 aaPredicted RBP4.32□□□□□ -1.72
SPT3YDR392W DRN1P53255 507 aaKnown RBP4.32□□□□□ -1.72
SPT3YDR392W FRE4P53746 719 aa4.32□□□□□ -1.72
SPT3YDR392W EFR3Q03653 782 aaKnown RBP4.32□□□□□ -1.72
SPT3YDR392W TRM12Q04235 462 aa4.32□□□□□ -1.72
SPT3YDR392W YDL086WQ07505 273 aa4.32□□□□□ -1.72
SPT3YDR392W Q0144Q9ZZW2 109 aa4.32□□□□□ -1.72
SPT3YDR392W SPO7P18410 259 aa4.31□□□□□ -1.72
SPT3YDR392W CYS4P32582 507 aaKnown RBP4.31□□□□□ -1.72
SPT3YDR392W YHL037CP38733 133 aa4.31□□□□□ -1.72
SPT3YDR392W VPS52P39904 641 aa4.31□□□□□ -1.72
SPT3YDR392W RNR4P49723 345 aaKnown RBP4.31□□□□□ -1.72
SPT3YDR392W PRP38Q00723 242 aaPredicted RBP4.31□□□□□ -1.72
SPT3YDR392W YMR210WQ03649 449 aa4.31□□□□□ -1.72
SPT3YDR392W TDA9Q04545 1251 aa4.31□□□□□ -1.72
SPT3YDR392W REX3Q12090 404 aa4.31□□□□□ -1.72
SPT3YDR392W YLR111WQ12528 110 aa4.31□□□□□ -1.72
SPT3YDR392W APL3P38065 1025 aa4.3□□□□□ -1.72
SPT3YDR392W YEL075CP39972 122 aa4.3□□□□□ -1.72
SPT3YDR392W IST3P40565 148 aaPredicted RBP4.3□□□□□ -1.72
SPT3YDR392W YRB30P53107 440 aaPredicted RBP4.3□□□□□ -1.72
SPT3YDR392W PGC1Q08959 321 aa4.3□□□□□ -1.72
SPT3YDR392W CHS5Q12114 671 aaKnown RBP4.3□□□□□ -1.72
SPT3YDR392W EMP46Q12396 444 aa4.3□□□□□ -1.72
SPT3YDR392W SEM1O94742 89 aa4.29□□□□□ -1.72
SPT3YDR392W PHO5P00635 467 aa4.29□□□□□ -1.72
SPT3YDR392W YFR010W-AP0C5N0 62 aa4.29□□□□□ -1.72
SPT3YDR392W MATALPHA2P0CY08 210 aa4.29□□□□□ -1.72
SPT3YDR392W HMLALPHA2P0CY09 210 aa4.29□□□□□ -1.72
SPT3YDR392W APN1P22936 367 aa4.29□□□□□ -1.72
SPT3YDR392W ERG8P24521 451 aa4.29□□□□□ -1.72
SPT3YDR392W DBF20P32328 564 aa4.29□□□□□ -1.72
SPT3YDR392W YMC1P32331 307 aa4.29□□□□□ -1.72
SPT3YDR392W PXL1P36166 706 aa4.29□□□□□ -1.72
SPT3YDR392W SPO22P40511 975 aa4.29□□□□□ -1.72
SPT3YDR392W CDC14Q00684 551 aa4.29□□□□□ -1.72
SPT3YDR392W REG1Q00816 1014 aa4.29□□□□□ -1.72
SPT3YDR392W NHX1Q04121 633 aa4.29□□□□□ -1.72
SPT3YDR392W YOL029CQ08187 201 aa4.29□□□□□ -1.72
SPT3YDR392W TCO89Q08921 799 aa4.29□□□□□ -1.72
SPT3YDR392W ATS1P31386 333 aa4.28□□□□□ -1.72
SPT3YDR392W DAL3P32459 195 aa4.28□□□□□ -1.72
SPT3YDR392W RPT5P33297 434 aaKnown RBP4.28□□□□□ -1.72
SPT3YDR392W YHR097CP38809 366 aaKnown RBP4.28□□□□□ -1.72
SPT3YDR392W RCY1P39531 840 aa4.28□□□□□ -1.72
SPT3YDR392W MIT1P40002 666 aa4.28□□□□□ -1.72
SPT3YDR392W TMA108P40462 946 aa4.28□□□□□ -1.72
SPT3YDR392W YJL132WP47014 750 aa4.28□□□□□ -1.72
SPT3YDR392W COG1P53079 417 aa4.28□□□□□ -1.72
SPT3YDR392W HOP2P53187 214 aa4.28□□□□□ -1.72
SPT3YDR392W YPR003CP53394 754 aa4.28□□□□□ -1.72
SPT3YDR392W MNT4P53745 580 aa4.28□□□□□ -1.72
SPT3YDR392W ULA1Q12059 462 aa4.28□□□□□ -1.72
SPT3YDR392W REP1P03871 373 aa4.27□□□□□ -1.73
SPT3YDR392W DCC1P25559 380 aa4.27□□□□□ -1.73
SPT3YDR392W AEP1P32493 518 aa4.27□□□□□ -1.73
SPT3YDR392W LOT5P34234 306 aa4.27□□□□□ -1.73
SPT3YDR392W SEO1P39709 593 aa4.27□□□□□ -1.73
SPT3YDR392W AVT7P40501 490 aa4.27□□□□□ -1.73
SPT3YDR392W IRC6P43615 237 aa4.27□□□□□ -1.73
SPT3YDR392W BUD13P46947 266 aaPredicted RBP4.27□□□□□ -1.73
SPT3YDR392W ABM1P47146 123 aa4.27□□□□□ -1.73
SPT3YDR392W YDL186WP48568 277 aa4.27□□□□□ -1.73
SPT3YDR392W EAF7P53911 425 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 94.7 ms