RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeast

Gene UBC13, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC13	YDR092W	RED1	P14291	827 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	CPR4	P25334	318 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	ECM25	P32525	599 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	NPL6	P32832	435 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	SWE1	P32944	819 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	STB6	P36085	766 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	CCT2	P39076	527 aa	Known RBP	3.05	□□□□□ -1.92
UBC13	YDR092W	YIL067C	P40514	678 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	DLD2	P46681	530 aa	Known RBP	3.05	□□□□□ -1.92
UBC13	YDR092W	SRB7	P47822	140 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	PCP1	P53259	346 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	YDR387C	Q04162	555 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	SGT1	Q08446	395 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	TIM18	Q08749	192 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	RTN2	Q12443	393 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	RRD2	Q12461	358 aa		3.05	□□□□□ -1.92
UBC13	YDR092W	RIP1	P08067	215 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	SAM1	P10659	382 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	RPL3	P14126	387 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	NOP1	P15646	327 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	SAM2	P19358	384 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	LDB16	P25587	256 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	TIP1	P27654	210 aa	Predicted RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	NAM9	P27929	486 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	APE2	P32454	952 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	HXT3	P32466	567 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	JNM1	P36224	373 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	RIB5	P38145	238 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	YHR054C	P38780	354 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	NOC2	P39744	710 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	REE1	P40893	198 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	LAM5	P43560	674 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	WWM1	P43582	211 aa	Known RBP	3.04	□□□□□ -1.92
UBC13	YDR092W	GOR1	P53839	350 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	YMR181C	Q03231	154 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	TAF11	Q04226	346 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	YLR287C	Q05881	355 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	RAD61	Q99359	647 aa		3.04	□□□□□ -1.92
UBC13	YDR092W	YLR278C	Q05854	1341 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	ARG4	P04076	463 aa	Predicted RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	RPI1	P23250	407 aa	Known RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	PPH22	P23595	377 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	YIM1	P28625	365 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	YEL045C	P32616	141 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	ARA1	P38115	344 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	NTC20	P38302	140 aa	Predicted RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	PTH1	P38876	190 aa	Known RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	YJR011C	P47086	261 aa	Predicted RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	SDT1	P53078	280 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	HER2	Q03557	464 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	RRP45	Q05636	305 aa	Known RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	TSR1	Q07381	788 aa	Known RBP	3.03	□□□□□ -1.92
UBC13	YDR092W	REX4	Q08237	289 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	SCM3	Q12334	223 aa		3.03	□□□□□ -1.92
UBC13	YDR092W	REC107	P21651	314 aa		3.02	□□□□□ -1.93
UBC13	YDR092W	MRPL4	P36517	319 aa		3.02	□□□□□ -1.93
UBC13	YDR092W	LYS1	P38998	373 aa	RIP-Chip data	3.02	□□□□□ -1.93	not detected
UBC13	YDR092W	OST1	P41543	476 aa	Known RBP	3.02	□□□□□ -1.93
UBC13	YDR092W	YNR048W	P53740	393 aa		3.02	□□□□□ -1.93
UBC13	YDR092W	TOF1	P53840	1238 aa		3.02	□□□□□ -1.93
UBC13	YDR092W	YIF1	P53845	314 aa	Known RBP	3.02	□□□□□ -1.93
UBC13	YDR092W	MDM1	Q01846	1127 aa		3.02	□□□□□ -1.93
UBC13	YDR092W	ERG3	P32353	365 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	NFU1	P32860	256 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	RFS1	P38234	210 aa	Known RBP	3.01	□□□□□ -1.93
UBC13	YDR092W	MTC6	P38849	526 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	FAA2	P39518	744 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	SAS2	P40963	338 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	COS5	P47187	383 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	RPA49	Q01080	415 aa	Predicted RBP	3.01	□□□□□ -1.93
UBC13	YDR092W	SYF1	Q04048	859 aa	Predicted RBP	3.01	□□□□□ -1.93
UBC13	YDR092W	COS7	Q07788	383 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	RRG7	Q08774	242 aa	Predicted RBP	3.01	□□□□□ -1.93
UBC13	YDR092W	YPR022C	Q12139	1133 aa		3.01	□□□□□ -1.93
UBC13	YDR092W	TEF1	P02994	458 aa	Known RBP	3	□□□□□ -1.93
UBC13	YDR092W	SRV2	P17555	526 aa	Known RBP	3	□□□□□ -1.93
UBC13	YDR092W	KRE2	P27809	442 aa		3	□□□□□ -1.93
UBC13	YDR092W	SIN4	P32259	974 aa		3	□□□□□ -1.93
UBC13	YDR092W	RML2	P32611	393 aa		3	□□□□□ -1.93
UBC13	YDR092W	PRE5	P40302	234 aa	Known RBP	3	□□□□□ -1.93
UBC13	YDR092W	PRM5	P40476	318 aa		3	□□□□□ -1.93
UBC13	YDR092W	FRE4	P53746	719 aa		3	□□□□□ -1.93
UBC13	YDR092W	TMS1	Q12116	473 aa		3	□□□□□ -1.93
UBC13	YDR092W	SEC63	P14906	663 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	PET123	P17558	318 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	DAL2	P25335	343 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	LSB5	P25369	354 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	SAS3	P34218	831 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	PIM1	P36775	1133 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	PCF11	P39081	626 aa	Predicted RBP	2.99	□□□□□ -1.93
UBC13	YDR092W	RPS0B	P46654	252 aa	Known RBP	2.99	□□□□□ -1.93
UBC13	YDR092W	NCA3	P46955	337 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	YGL138C	P53122	345 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	YGL039W	P53183	348 aa	Known RBP	2.99	□□□□□ -1.93
UBC13	YDR092W	ADD37	Q03233	198 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	PPM1	Q04081	328 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	HRI1	Q05905	244 aa	Known RBP	2.99	□□□□□ -1.93
UBC13	YDR092W	SIL1	Q08199	421 aa		2.99	□□□□□ -1.93
UBC13	YDR092W	SPO7	P18410	259 aa		2.98	□□□□□ -1.93
UBC13	YDR092W	ISY1	P21374	235 aa	Predicted RBP	2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 109.2 ms