RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C CYS4P32582 507 aaKnown RBP1.29□□□□□ -2.2
SSS1YDR086C YHR131CP38835 850 aa1.29□□□□□ -2.2
SSS1YDR086C KEL1P38853 1164 aaKnown RBP1.29□□□□□ -2.2
SSS1YDR086C ECM27P47144 725 aa1.29□□□□□ -2.2
SSS1YDR086C MKC7P53379 596 aa1.29□□□□□ -2.2
SSS1YDR086C ARE2P53629 642 aaKnown RBP1.29□□□□□ -2.2
SSS1YDR086C YNR048WP53740 393 aa1.29□□□□□ -2.2
SSS1YDR086C OPY2Q06810 360 aa1.29□□□□□ -2.2
SSS1YDR086C SNX3Q08826 162 aaKnown RBP1.29□□□□□ -2.2
SSS1YDR086C YPS3Q12303 508 aa1.29□□□□□ -2.2
SSS1YDR086C HIS4P00815 799 aaKnown RBP1.28□□□□□ -2.2
SSS1YDR086C DFR1P07807 211 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SSS1YDR086C SNT1P25357 1226 aa1.28□□□□□ -2.2
SSS1YDR086C PRR1P28708 518 aa1.28□□□□□ -2.2
SSS1YDR086C ECM25P32525 599 aa1.28□□□□□ -2.2
SSS1YDR086C WBP1P33767 430 aaKnown RBP1.28□□□□□ -2.2
SSS1YDR086C SPT10P35208 640 aa1.28□□□□□ -2.2
SSS1YDR086C NOP4P37838 685 aaKnown RBP1.28□□□□□ -2.2
SSS1YDR086C YBR137WP38276 179 aa1.28□□□□□ -2.2
SSS1YDR086C TIM17P39515 158 aa1.28□□□□□ -2.2
SSS1YDR086C YMR147WP40218 223 aaKnown RBP1.28□□□□□ -2.2
SSS1YDR086C SSU1P41930 458 aa1.28□□□□□ -2.2
SSS1YDR086C DUO1P53168 247 aaKnown RBP1.28□□□□□ -2.2
SSS1YDR086C PCP1P53259 346 aa1.28□□□□□ -2.2
SSS1YDR086C CAF130P53280 1122 aaPredicted RBP1.28□□□□□ -2.2
SSS1YDR086C DSL1P53847 754 aa1.28□□□□□ -2.2
SSS1YDR086C YML131WQ03102 365 aa1.28□□□□□ -2.2
SSS1YDR086C ATG16Q03818 150 aa1.28□□□□□ -2.2
SSS1YDR086C JID1Q12350 301 aa1.28□□□□□ -2.2
SSS1YDR086C SEC39Q12745 709 aa1.28□□□□□ -2.2
SSS1YDR086C YDL007C-AQ2V2Q0 85 aa1.28□□□□□ -2.2
SSS1YDR086C TEF1P02994 458 aaKnown RBP1.27□□□□□ -2.21
SSS1YDR086C CYC3P06182 269 aa1.27□□□□□ -2.21
SSS1YDR086C SEC53P07283 254 aaKnown RBP1.27□□□□□ -2.21
SSS1YDR086C CDC16P09798 840 aa1.27□□□□□ -2.21
SSS1YDR086C SLY1P22213 666 aa1.27□□□□□ -2.21
SSS1YDR086C MRE11P32829 692 aa1.27□□□□□ -2.21
SSS1YDR086C CSE2P33308 149 aa1.27□□□□□ -2.21
SSS1YDR086C MIG3P39943 394 aa1.27□□□□□ -2.21
SSS1YDR086C SGN1P40561 250 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
SSS1YDR086C MDE1P47095 244 aa1.27□□□□□ -2.21
SSS1YDR086C FLC3P53121 802 aa1.27□□□□□ -2.21
SSS1YDR086C YGL108CP53139 140 aa1.27□□□□□ -2.21
SSS1YDR086C RMD9P53140 646 aaKnown RBP1.27□□□□□ -2.21
SSS1YDR086C MTQ1P53944 314 aa1.27□□□□□ -2.21
SSS1YDR086C RCN2Q12044 265 aa1.27□□□□□ -2.21
SSS1YDR086C IZH2Q12442 317 aa1.27□□□□□ -2.21
SSS1YDR086C PRM7Q12459 698 aa1.27□□□□□ -2.21
SSS1YDR086C GAL80P04387 435 aa1.26□□□□□ -2.21
SSS1YDR086C CBP6P07253 162 aaPredicted RBP1.26□□□□□ -2.21
SSS1YDR086C ATP10P18496 279 aa1.26□□□□□ -2.21
SSS1YDR086C RPB5P20434 215 aa1.26□□□□□ -2.21
SSS1YDR086C TFG2P41896 400 aaPredicted RBP1.26□□□□□ -2.21
SSS1YDR086C CRH1P53301 507 aa1.26□□□□□ -2.21
SSS1YDR086C GIR2Q03768 265 aaPredicted RBP1.26□□□□□ -2.21
SSS1YDR086C YMR018WQ04364 514 aa1.26□□□□□ -2.21
SSS1YDR086C HSP31Q04432 237 aa1.26□□□□□ -2.21
SSS1YDR086C YPR022CQ12139 1133 aa1.26□□□□□ -2.21
SSS1YDR086C SNU66Q12420 587 aaPredicted RBP1.26□□□□□ -2.21
SSS1YDR086C RTP1Q12751 981 aa1.26□□□□□ -2.21
SSS1YDR086C AAT2P23542 418 aaKnown RBP1.25□□□□□ -2.21
SSS1YDR086C RAD14P28519 371 aa1.25□□□□□ -2.21
SSS1YDR086C ITR1P30605 584 aa1.25□□□□□ -2.21
SSS1YDR086C APE2P32454 952 aaKnown RBP1.25□□□□□ -2.21
SSS1YDR086C RTC2P38279 296 aa1.25□□□□□ -2.21
SSS1YDR086C LYS1P38998 373 aaRIP-Chip data1.25□□□□□ -2.21not detected
SSS1YDR086C FRE4P53746 719 aa1.25□□□□□ -2.21
SSS1YDR086C ADA2Q02336 434 aa1.25□□□□□ -2.21
SSS1YDR086C CMS1Q07897 291 aaKnown RBP1.25□□□□□ -2.21
SSS1YDR086C DNL4Q08387 944 aaPredicted RBP1.25□□□□□ -2.21
SSS1YDR086C COX4P04037 155 aa1.24□□□□□ -2.21
SSS1YDR086C NAM2P11325 894 aa1.24□□□□□ -2.21
SSS1YDR086C PWP2P25635 923 aaKnown RBP1.24□□□□□ -2.21
SSS1YDR086C DPH2P32461 534 aa1.24□□□□□ -2.21
SSS1YDR086C RML2P32611 393 aa1.24□□□□□ -2.21
SSS1YDR086C VPS24P36095 224 aaKnown RBP1.24□□□□□ -2.21
SSS1YDR086C THI2P38141 450 aa1.24□□□□□ -2.21
SSS1YDR086C PCF11P39081 626 aaPredicted RBP1.24□□□□□ -2.21
SSS1YDR086C TPM2P40414 161 aa1.24□□□□□ -2.21
SSS1YDR086C DLD2P46681 530 aaKnown RBP1.24□□□□□ -2.21
SSS1YDR086C PET130P47065 347 aa1.24□□□□□ -2.21
SSS1YDR086C MEP3P53390 489 aa1.24□□□□□ -2.21
SSS1YDR086C RHO5P53879 331 aaKnown RBP1.24□□□□□ -2.21
SSS1YDR086C MRPS16Q02608 121 aa1.24□□□□□ -2.21
SSS1YDR086C YDR387CQ04162 555 aa1.24□□□□□ -2.21
SSS1YDR086C TAP42Q04372 366 aa1.24□□□□□ -2.21
SSS1YDR086C RFM1Q12192 310 aa1.24□□□□□ -2.21
SSS1YDR086C YRM1Q12340 786 aa1.24□□□□□ -2.21
SSS1YDR086C SEM1O94742 89 aa1.23□□□□□ -2.21
SSS1YDR086C RPI1P23250 407 aaKnown RBP1.23□□□□□ -2.21
SSS1YDR086C AFG1P32317 509 aa1.23□□□□□ -2.21
SSS1YDR086C PRP21P32524 280 aaPredicted RBP1.23□□□□□ -2.21
SSS1YDR086C IES6P32617 166 aa1.23□□□□□ -2.21
SSS1YDR086C FMT1P32785 401 aa1.23□□□□□ -2.21
SSS1YDR086C DTR1P38125 572 aa1.23□□□□□ -2.21
SSS1YDR086C OM14P38325 134 aa1.23□□□□□ -2.21
SSS1YDR086C YHR054CP38780 354 aa1.23□□□□□ -2.21
SSS1YDR086C CCT2P39076 527 aaKnown RBP1.23□□□□□ -2.21
SSS1YDR086C YER186CP40101 306 aa1.23□□□□□ -2.21
SSS1YDR086C JLP2P40206 208 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms