RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C TMC1Q08422 150 aaPredicted RBP2.85□□□□□ -1.95
UBX3YDL091C SAM1P10659 382 aaKnown RBP2.84□□□□□ -1.96
UBX3YDL091C CLN3P13365 580 aa2.84□□□□□ -1.96
UBX3YDL091C RED1P14291 827 aa2.84□□□□□ -1.96
UBX3YDL091C SAM2P19358 384 aaKnown RBP2.84□□□□□ -1.96
UBX3YDL091C PMT1P33775 817 aa2.84□□□□□ -1.96
UBX3YDL091C STB6P36085 766 aa2.84□□□□□ -1.96
UBX3YDL091C YCR041WP37265 110 aa2.84□□□□□ -1.96
UBX3YDL091C MST28P39552 234 aa2.84□□□□□ -1.96
UBX3YDL091C OST1P41543 476 aaKnown RBP2.84□□□□□ -1.96
UBX3YDL091C TFG2P41896 400 aaPredicted RBP2.84□□□□□ -1.96
UBX3YDL091C HXT14P42833 540 aa2.84□□□□□ -1.96
UBX3YDL091C IRC6P43615 237 aa2.84□□□□□ -1.96
UBX3YDL091C YLR152CP54072 576 aa2.84□□□□□ -1.96
UBX3YDL091C YML133CQ03099 1374 aa2.84□□□□□ -1.96
UBX3YDL091C YLL067CQ07888 1374 aa2.84□□□□□ -1.96
UBX3YDL091C YLL066CQ99208 1374 aa2.84□□□□□ -1.96
UBX3YDL091C RAD61Q99359 647 aa2.84□□□□□ -1.96
UBX3YDL091C REC107P21651 314 aa2.83□□□□□ -1.96
UBX3YDL091C CDC60P26637 1090 aaKnown RBP2.83□□□□□ -1.96
UBX3YDL091C AFG1P32317 509 aa2.83□□□□□ -1.96
UBX3YDL091C REC114P32841 428 aa2.83□□□□□ -1.96
UBX3YDL091C MTC6P38849 526 aa2.83□□□□□ -1.96
UBX3YDL091C CCT2P39076 527 aaKnown RBP2.83□□□□□ -1.96
UBX3YDL091C YGR149WP48236 432 aa2.83□□□□□ -1.96
UBX3YDL091C YIP1P53039 248 aa2.83□□□□□ -1.96
UBX3YDL091C RMD9P53140 646 aaKnown RBP2.83□□□□□ -1.96
UBX3YDL091C TIM10P87108 93 aa2.83□□□□□ -1.96
UBX3YDL091C SYF1Q04048 859 aaPredicted RBP2.83□□□□□ -1.96
UBX3YDL091C RQC1Q05468 723 aaKnown RBP2.83□□□□□ -1.96
UBX3YDL091C MUM3Q08750 479 aa2.83□□□□□ -1.96
UBX3YDL091C ADH2P00331 348 aaKnown RBP2.82□□□□□ -1.96
UBX3YDL091C MET17P06106 444 aa2.82□□□□□ -1.96
UBX3YDL091C CLC1P17891 233 aa2.82□□□□□ -1.96
UBX3YDL091C CLB3P24870 427 aa2.82□□□□□ -1.96
UBX3YDL091C TIP1P27654 210 aaPredicted RBP2.82□□□□□ -1.96
UBX3YDL091C PRP21P32524 280 aaPredicted RBP2.82□□□□□ -1.96
UBX3YDL091C PIM1P36775 1133 aa2.82□□□□□ -1.96
UBX3YDL091C PRM5P40476 318 aa2.82□□□□□ -1.96
UBX3YDL091C WWM1P43582 211 aaKnown RBP2.82□□□□□ -1.96
UBX3YDL091C KTR5P53966 522 aaPredicted RBP2.82□□□□□ -1.96
UBX3YDL091C GIR2Q03768 265 aaPredicted RBP2.82□□□□□ -1.96
UBX3YDL091C RBD2Q12270 262 aa2.82□□□□□ -1.96
UBX3YDL091C SCM3Q12334 223 aa2.82□□□□□ -1.96
UBX3YDL091C PET123P17558 318 aa2.81□□□□□ -1.96
UBX3YDL091C GPI10P30777 616 aa2.81□□□□□ -1.96
UBX3YDL091C ECM25P32525 599 aa2.81□□□□□ -1.96
UBX3YDL091C NIP100P33420 868 aa2.81□□□□□ -1.96
UBX3YDL091C RIB5P38145 238 aa2.81□□□□□ -1.96
UBX3YDL091C TIS11P47977 285 aa2.81□□□□□ -1.96
UBX3YDL091C PCP1P53259 346 aa2.81□□□□□ -1.96
UBX3YDL091C HXT11P54862 567 aa2.81□□□□□ -1.96
UBX3YDL091C HER2Q03557 464 aa2.81□□□□□ -1.96
UBX3YDL091C HRI1Q05905 244 aaKnown RBP2.81□□□□□ -1.96
UBX3YDL091C VTA1Q06263 330 aa2.81□□□□□ -1.96
UBX3YDL091C RRG1Q12167 365 aaPredicted RBP2.81□□□□□ -1.96
UBX3YDL091C SPS4P09937 338 aa2.8□□□□□ -1.96
UBX3YDL091C SRV2P17555 526 aaKnown RBP2.8□□□□□ -1.96
UBX3YDL091C ROX1P25042 368 aa2.8□□□□□ -1.96
UBX3YDL091C LAM5P43560 674 aa2.8□□□□□ -1.96
UBX3YDL091C VTC2P43585 828 aa2.8□□□□□ -1.96
UBX3YDL091C MNP1P53163 194 aaPredicted RBP2.8□□□□□ -1.96
UBX3YDL091C DSL1P53847 754 aa2.8□□□□□ -1.96
UBX3YDL091C YMR181CQ03231 154 aa2.8□□□□□ -1.96
UBX3YDL091C TAF11Q04226 346 aa2.8□□□□□ -1.96
UBX3YDL091C HSP31Q04432 237 aa2.8□□□□□ -1.96
UBX3YDL091C TIM18Q08749 192 aa2.8□□□□□ -1.96
UBX3YDL091C PKH2Q12236 1081 aaKnown RBP2.8□□□□□ -1.96
UBX3YDL091C GRX6Q12438 231 aa2.8□□□□□ -1.96
UBX3YDL091C SOD1P00445 154 aaKnown RBP2.79□□□□□ -1.96
UBX3YDL091C GPH1P06738 902 aaKnown RBP2.79□□□□□ -1.96
UBX3YDL091C DAL2P25335 343 aa2.79□□□□□ -1.96
UBX3YDL091C RVS161P25343 265 aaKnown RBP2.79□□□□□ -1.96
UBX3YDL091C IDH2P28241 369 aaKnown RBP2.79□□□□□ -1.96
UBX3YDL091C ITR1P30605 584 aa2.79□□□□□ -1.96
UBX3YDL091C NPL6P32832 435 aa2.79□□□□□ -1.96
UBX3YDL091C PRS1P32895 427 aaKnown RBP2.79□□□□□ -1.96
UBX3YDL091C HCS1P34243 683 aa2.79□□□□□ -1.96
UBX3YDL091C SMF1P38925 575 aa2.79□□□□□ -1.96
UBX3YDL091C PAN6P40459 309 aa2.79□□□□□ -1.96
UBX3YDL091C SSU1P41930 458 aa2.79□□□□□ -1.96
UBX3YDL091C NCA3P46955 337 aa2.79□□□□□ -1.96
UBX3YDL091C ECM27P47144 725 aa2.79□□□□□ -1.96
UBX3YDL091C MDG1P53885 366 aa2.79□□□□□ -1.96
UBX3YDL091C YDR387CQ04162 555 aa2.79□□□□□ -1.96
UBX3YDL091C YPR022CQ12139 1133 aa2.79□□□□□ -1.96
UBX3YDL091C RTN2Q12443 393 aa2.79□□□□□ -1.96
UBX3YDL091C YLR278CQ05854 1341 aa2.78□□□□□ -1.96
UBX3YDL091C HIS4P00815 799 aaKnown RBP2.78□□□□□ -1.96
UBX3YDL091C RIP1P08067 215 aa2.78□□□□□ -1.96
UBX3YDL091C SEC63P14906 663 aa2.78□□□□□ -1.96
UBX3YDL091C BYE1P36106 594 aa2.78□□□□□ -1.96
UBX3YDL091C MSG5P38590 489 aa2.78□□□□□ -1.96
UBX3YDL091C MTM1P53320 366 aa2.78□□□□□ -1.96
UBX3YDL091C YNR048WP53740 393 aa2.78□□□□□ -1.96
UBX3YDL091C YMR027WQ04371 470 aa2.78□□□□□ -1.96
UBX3YDL091C FDH1Q08911 376 aa2.78□□□□□ -1.96
UBX3YDL091C DBF4P32325 704 aa2.77□□□□□ -1.97
UBX3YDL091C APE2P32454 952 aaKnown RBP2.77□□□□□ -1.97
UBX3YDL091C YBR137WP38276 179 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms