RNA–Protein interactions for RNA: YDL083C

RPS16B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS16B, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS16B	YDL083C	SIC1	P38634	284 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	UIP3	P39547	235 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	PCL6	P40038	420 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	SNL1	P40548	159 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	DSN1	P40568	576 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RPS16B	YDL083C	YJL118W	P47022	219 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	TMA22	P47089	198 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS16B	YDL083C	BIO3	P50277	480 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	YGR079W	P53249	370 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	ASI2	P53895	289 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	MRP51	Q02950	344 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	YMR265C	Q03508	461 aa	Known RBP	4.99	□□□□□ -1.61
RPS16B	YDL083C	USA1	Q03714	838 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	TY1A-DR2	Q03964	440 aa	Known RBP	4.99	□□□□□ -1.61
RPS16B	YDL083C	MYO5	Q04439	1219 aa	Known RBP	4.99	□□□□□ -1.61
RPS16B	YDL083C	SEC10	Q06245	871 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	SYO1	Q07395	620 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	SWM1	Q12379	170 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	ATG31	Q12421	196 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	NCB2	Q92317	146 aa		4.99	□□□□□ -1.61
RPS16B	YDL083C	TUS1	Q06412	1307 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	YLR415C	O13578	112 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	RHO2	P06781	192 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	HEM1	P09950	548 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	YLL053C	P0CD98	152 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	RPS4A	P0CX35	261 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	RPS4B	P0CX36	261 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	RPS16A	P0CX51	143 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	RPS16B	P0CX52	143 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	TCP1	P12612	559 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	FBA1	P14540	359 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RPS16B	YDL083C	FEN2	P25621	512 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	PSO2	P30620	661 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	SOF1	P33750	489 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	SPT10	P35208	640 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	RPF2	P36160	344 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	PPS1	P38148	807 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	YHR112C	P38716	378 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	SPC97	P38863	823 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	PCF11	P39081	626 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	DIA1	P54005	336 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	APM1	Q00776	475 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	SPP2	Q02521	185 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	YMR209C	Q03648	457 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	GFD1	Q04839	188 aa	Known RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	ARO10	Q06408	635 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	TLG2	Q08144	397 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	SMC5	Q08204	1093 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	YOL075C	Q08234	1294 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	DNL4	Q08387	944 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS16B	YDL083C	RAX1	Q08760	435 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	BAG7	Q12128	409 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	RUP1	Q12242	671 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	YPR1	Q12458	312 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	SPO24	Q3E752	67 aa		4.98	□□□□□ -1.61
RPS16B	YDL083C	SNF6	P18888	332 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	VPS1	P21576	704 aa	Known RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	APA2	P22108	325 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	PUP3	P25451	205 aa	Known RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	MGR1	P25573	417 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	FRE1	P32791	686 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	EMP70	P32802	667 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	UBC6	P33296	250 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	ASH1	P34233	588 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	DOA1	P36037	715 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	NTR2	P36118	322 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	VHC1	P38329	1120 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	HXT9	P40885	567 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	OYE3	P41816	400 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	BNA3	P47039	444 aa	Known RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	NPA3	P47122	385 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	IBA57	P47158	497 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	SAM50	P53969	484 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	HXT11	P54862	567 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	STD1	Q02794	444 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	CTK1	Q03957	528 aa	Known RBP	4.97	□□□□□ -1.61
RPS16B	YDL083C	THI7	Q05998	598 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	GMC2	Q06201	188 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	CDA2	Q06703	312 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	SNA4	Q07549	140 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RPS16B	YDL083C	INP53	Q12271	1107 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	YDR262W	Q12331	272 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	RGS2	Q99188	309 aa		4.97	□□□□□ -1.61
RPS16B	YDL083C	RAD1	P06777	1100 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	SPE1	P08432	466 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	MATALPHA1	P0CY06	175 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	HMLALPHA1	P0CY07	175 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	MRP1	P10662	321 aa	Known RBP	4.96	□□□□□ -1.62
RPS16B	YDL083C	CBF1	P17106	351 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	KRE2	P27809	442 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	CIN8	P27895	1000 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RPS16B	YDL083C	LHS1	P36016	881 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	SNU114	P36048	1008 aa	Known RBP	4.96	□□□□□ -1.62
RPS16B	YDL083C	AAP1	P37898	856 aa	Known RBP	4.96	□□□□□ -1.62
RPS16B	YDL083C	IML3	P38265	245 aa		4.96	□□□□□ -1.62
RPS16B	YDL083C	SPP381	P38282	291 aa	Predicted RBP	4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms