RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C MMT1Q03218 510 aa5.58□□□□□ -1.52
MDH3YDL078C ROT1Q03691 256 aa5.58□□□□□ -1.52
MDH3YDL078C DXO1Q06349 442 aa5.58□□□□□ -1.52
MDH3YDL078C CRN1Q06440 651 aa5.58□□□□□ -1.52
MDH3YDL078C GIC2Q06648 383 aa5.58□□□□□ -1.52
MDH3YDL078C YDL121CQ07541 149 aa5.58□□□□□ -1.52
MDH3YDL078C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
MDH3YDL078C KCS1Q12494 1050 aa5.58□□□□□ -1.52
MDH3YDL078C IRA1P18963 3092 aa5.57□□□□□ -1.52
MDH3YDL078C PHO5P00635 467 aa5.57□□□□□ -1.52
MDH3YDL078C GCY1P14065 312 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
MDH3YDL078C MET8P15807 274 aa5.57□□□□□ -1.52
MDH3YDL078C DAL82P21705 255 aa5.57□□□□□ -1.52
MDH3YDL078C DBF2P22204 572 aa5.57□□□□□ -1.52
MDH3YDL078C RNQ1P25367 405 aa5.57□□□□□ -1.52
MDH3YDL078C ITR1P30605 584 aa5.57□□□□□ -1.52
MDH3YDL078C CRM1P30822 1084 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C ZIP1P31111 875 aa5.57□□□□□ -1.52
MDH3YDL078C HOG1P32485 435 aa5.57□□□□□ -1.52
MDH3YDL078C PET309P32522 965 aaPredicted RBP5.57□□□□□ -1.52
MDH3YDL078C CYM1P32898 989 aa5.57□□□□□ -1.52
MDH3YDL078C SKT5P34226 696 aa5.57□□□□□ -1.52
MDH3YDL078C EMC3P36039 253 aa5.57□□□□□ -1.52
MDH3YDL078C SET3P36124 751 aa5.57□□□□□ -1.52
MDH3YDL078C UBA4P38820 440 aa5.57□□□□□ -1.52
MDH3YDL078C LYS1P38998 373 aaRIP-Chip data5.57□□□□□ -1.52not detected
MDH3YDL078C MTW1P39731 289 aa5.57□□□□□ -1.52
MDH3YDL078C SMX2P40204 77 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C RIC1P40395 1056 aa5.57□□□□□ -1.52
MDH3YDL078C CAB2P40506 365 aa5.57□□□□□ -1.52
MDH3YDL078C SWP82P43554 623 aa5.57□□□□□ -1.52
MDH3YDL078C YJL055WP47044 245 aa5.57□□□□□ -1.52
MDH3YDL078C YJL049WP47048 450 aa5.57□□□□□ -1.52
MDH3YDL078C CGR1P53188 120 aa5.57□□□□□ -1.52
MDH3YDL078C COS6P53344 381 aa5.57□□□□□ -1.52
MDH3YDL078C HST3P53687 447 aa5.57□□□□□ -1.52
MDH3YDL078C PRO2P54885 456 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C NOG1Q02892 647 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C HPT1Q04178 221 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C TAF11Q04226 346 aa5.57□□□□□ -1.52
MDH3YDL078C TRM12Q04235 462 aa5.57□□□□□ -1.52
MDH3YDL078C BUD22Q04347 519 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C SPO20Q04359 397 aa5.57□□□□□ -1.52
MDH3YDL078C COA4Q05809 96 aa5.57□□□□□ -1.52
MDH3YDL078C STP3Q05937 343 aa5.57□□□□□ -1.52
MDH3YDL078C DIC1Q06143 298 aa5.57□□□□□ -1.52
MDH3YDL078C DTD1Q07648 150 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C YEH2Q07950 538 aa5.57□□□□□ -1.52
MDH3YDL078C OSW1Q08692 278 aa5.57□□□□□ -1.52
MDH3YDL078C RUP1Q12242 671 aa5.57□□□□□ -1.52
MDH3YDL078C SNU23Q12368 194 aaPredicted RBP5.57□□□□□ -1.52
MDH3YDL078C CMR1Q12510 522 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C RRP12Q12754 1228 aaKnown RBP5.57□□□□□ -1.52
MDH3YDL078C YIL046W-AQ3E7Z4 54 aa5.57□□□□□ -1.52
MDH3YDL078C RGS2Q99188 309 aa5.57□□□□□ -1.52
MDH3YDL078C ILV2P07342 687 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C LAT1P12695 482 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C STE4P18851 423 aa5.56□□□□□ -1.52
MDH3YDL078C URA4P20051 364 aa5.56□□□□□ -1.52
MDH3YDL078C CLB3P24870 427 aa5.56□□□□□ -1.52
MDH3YDL078C KRR1P25586 316 aaPredicted RBP5.56□□□□□ -1.52
MDH3YDL078C YCR051WP25631 222 aa5.56□□□□□ -1.52
MDH3YDL078C PRP19P32523 503 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C SKN1P33336 771 aa5.56□□□□□ -1.52
MDH3YDL078C YKL100CP34248 587 aa5.56□□□□□ -1.52
MDH3YDL078C OAF3P36023 863 aa5.56□□□□□ -1.52
MDH3YDL078C MRPL17P36528 281 aa5.56□□□□□ -1.52
MDH3YDL078C RIM11P38615 370 aa5.56□□□□□ -1.52
MDH3YDL078C MUP3P38734 546 aa5.56□□□□□ -1.52
MDH3YDL078C YHR127WP38833 243 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C RTT105P40063 208 aa5.56□□□□□ -1.52
MDH3YDL078C LRO1P40345 661 aa5.56□□□□□ -1.52
MDH3YDL078C QDR2P40474 542 aa5.56□□□□□ -1.52
MDH3YDL078C VMA10P48836 114 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C PAN2P53010 1115 aaPredicted RBP5.56□□□□□ -1.52
MDH3YDL078C ARE2P53629 642 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C TAF12Q03761 539 aa5.56□□□□□ -1.52
MDH3YDL078C HMO1Q03973 246 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C BCH1Q05029 724 aa5.56□□□□□ -1.52
MDH3YDL078C MET32Q12041 191 aa5.56□□□□□ -1.52
MDH3YDL078C DIN7Q12086 430 aa5.56□□□□□ -1.52
MDH3YDL078C UPC2Q12151 913 aa5.56□□□□□ -1.52
MDH3YDL078C UBX3Q12229 455 aa5.56□□□□□ -1.52
MDH3YDL078C SUL2Q12325 893 aa5.56□□□□□ -1.52
MDH3YDL078C DBP10Q12389 995 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C YMR030W-AQ3E760 96 aa5.56□□□□□ -1.52
MDH3YDL078C HRP1Q99383 534 aaKnown RBP5.56□□□□□ -1.52
MDH3YDL078C CDC21P06785 304 aa5.55□□□□□ -1.52
MDH3YDL078C FUR1P18562 216 aaKnown RBP5.55□□□□□ -1.52
MDH3YDL078C CLN2P20438 545 aa5.55□□□□□ -1.52
MDH3YDL078C DBP3P20447 523 aaKnown RBP5.55□□□□□ -1.52
MDH3YDL078C NTH1P32356 751 aa5.55□□□□□ -1.52
MDH3YDL078C MGM101P32787 269 aaKnown RBP5.55□□□□□ -1.52
MDH3YDL078C PTM1P32857 523 aa5.55□□□□□ -1.52
MDH3YDL078C PDR3P33200 976 aa5.55□□□□□ -1.52
MDH3YDL078C TPO5P36029 618 aa5.55□□□□□ -1.52
MDH3YDL078C UBS1P38290 277 aa5.55□□□□□ -1.52
MDH3YDL078C YJL206CP39529 758 aa5.55□□□□□ -1.52
MDH3YDL078C NPT1P39683 429 aaKnown RBP5.55□□□□□ -1.52
MDH3YDL078C IES5P40060 125 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms