RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	APT1	P49435	187 aa	Known RBP	4.04	□□□□□ -1.76
HCM1	YCR065W	YGL185C	P53100	379 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	OKP1	P53298	406 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	RTT102	P53330	157 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	RHO5	P53879	331 aa	Known RBP	4.04	□□□□□ -1.76
HCM1	YCR065W	PRM15	Q03262	622 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	YMR114C	Q04471	368 aa	Known RBP	4.04	□□□□□ -1.76
HCM1	YCR065W	YMR226C	Q05016	267 aa	Known RBP	4.04	□□□□□ -1.76
HCM1	YCR065W	SGO1	Q08490	590 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	MCH5	Q08777	521 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	RSA1	Q08932	381 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	YPL225W	Q08971	146 aa	Known RBP	4.04	□□□□□ -1.76
HCM1	YCR065W	MDM20	Q12387	796 aa	Known RBP	4.04	□□□□□ -1.76
HCM1	YCR065W	YOR111W	Q99210	232 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	ECM3	Q99252	613 aa		4.04	□□□□□ -1.76
HCM1	YCR065W	CDC37	P06101	506 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	FRS1	P15624	595 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	COQ1	P18900	473 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	UBA1	P22515	1024 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	MEK1	P24719	497 aa	Predicted RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	CIN8	P27895	1000 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	BEM1	P29366	551 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	NDI1	P32340	513 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	GCG1	P32656	232 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	MRPL17	P36528	281 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	CST26	P38226	397 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	SSH1	P38353	490 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	SCS2	P40075	244 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	RGI2	P40188	164 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	PFK26	P40433	827 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	SAD1	P43589	448 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	FMS1	P50264	508 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	BOP3	P53958	396 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	NUP116	Q02630	1113 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	SKI8	Q02793	397 aa	Predicted RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	PLP1	Q04004	230 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	RPN9	Q04062	393 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	RCO1	Q04779	684 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YLR283W	Q05867	314 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	CDD1	Q06549	142 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	IWR1	Q07532	353 aa	Predicted RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	RTT109	Q07794	436 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	NBP2	Q12163	236 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YDR061W	Q12298	539 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	HMS1	Q12398	434 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	ATG31	Q12421	196 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	SET6	Q12529	373 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	TDH2	P00358	332 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
HCM1	YCR065W	CBP1	P07252	654 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	RPL27A	P0C2H6	136 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	RPL27B	P0C2H7	136 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	ABF1	P14164	731 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	POL30	P15873	258 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	SNF6	P18888	332 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	ZRC1	P20107	442 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	HIS7	P33734	552 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	YOX1	P34161	385 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YKR075C	P36155	307 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	APT2	P36973	181 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	VID24	P38263	362 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	URA8	P38627	578 aa	Predicted RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
HCM1	YCR065W	EAF5	P39995	279 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YER186C	P40101	306 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	AGP3	P43548	558 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	DIA3	P52290	468 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	UBC11	P52492	156 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YGL204C	P53089	101 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YGL159W	P53110	370 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	NSA1	P53136	463 aa	Predicted RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	RMD9	P53140	646 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	COX18	P53239	316 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
HCM1	YCR065W	MMT1	Q03218	510 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	TAF12	Q03761	539 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	CTK1	Q03957	528 aa	Known RBP	4.03	□□□□□ -1.76
HCM1	YCR065W	YLR407W	Q06070	228 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	SPO77	Q06134	477 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YOL075C	Q08234	1294 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	YDR262W	Q12331	272 aa		4.03	□□□□□ -1.76
HCM1	YCR065W	PGK1	P00560	416 aa	Known RBP	4.02	□□□□□ -1.77
HCM1	YCR065W	RPL24A	P04449	155 aa	Known RBP	4.02	□□□□□ -1.77
HCM1	YCR065W	RAD1	P06777	1100 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	SEC65	P29478	273 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	PRO3	P32263	286 aa	Known RBP	4.02	□□□□□ -1.77
HCM1	YCR065W	KAR9	P32526	644 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	RAD24	P32641	659 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	MRPL4	P36517	319 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	YBR139W	P38109	508 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	THI2	P38141	450 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	YBL029W	P38201	376 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	SEN34	P39707	275 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	IRC7	P43623	340 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	NMD5	P46970	1048 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	RPA34	P47006	233 aa	Predicted RBP	4.02	□□□□□ -1.77
HCM1	YCR065W	RTT101	P47050	842 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	ASI1	P54074	624 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	REC102	Q02721	264 aa		4.02	□□□□□ -1.77
HCM1	YCR065W	RCR2	Q03446	210 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms