RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W HEF3P53978 1044 aaKnown RBP2.84□□□□□ -1.95
SWD3YBR175W CSI1Q04368 295 aa2.84□□□□□ -1.95
SWD3YBR175W MDM30Q05930 598 aa2.84□□□□□ -1.95
SWD3YBR175W RAD34Q06665 692 aa2.84□□□□□ -1.95
SWD3YBR175W IPK1Q06667 281 aa2.84□□□□□ -1.95
SWD3YBR175W POS5Q06892 414 aa2.84□□□□□ -1.95
SWD3YBR175W THP1Q08231 455 aa2.84□□□□□ -1.95
SWD3YBR175W YOR012WQ12351 137 aa2.84□□□□□ -1.95
SWD3YBR175W DNF2Q12675 1612 aa2.83□□□□□ -1.96
SWD3YBR175W SCEIP03882 235 aa2.83□□□□□ -1.96
SWD3YBR175W ADE4P04046 510 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W ADE5,7P07244 802 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W SEC63P14906 663 aa2.83□□□□□ -1.96
SWD3YBR175W TKL1P23254 680 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W CNA1P23287 553 aa2.83□□□□□ -1.96
SWD3YBR175W ILV6P25605 309 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W PSO2P30620 661 aa2.83□□□□□ -1.96
SWD3YBR175W HMX1P32339 317 aa2.83□□□□□ -1.96
SWD3YBR175W SAC1P32368 623 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W COT1P32798 439 aa2.83□□□□□ -1.96
SWD3YBR175W CUE2P36075 443 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W YKL070WP36087 169 aa2.83□□□□□ -1.96
SWD3YBR175W DUG2P38149 878 aa2.83□□□□□ -1.96
SWD3YBR175W RRN10P38204 145 aa2.83□□□□□ -1.96
SWD3YBR175W KAP104P38217 918 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W SWC5P38326 303 aa2.83□□□□□ -1.96
SWD3YBR175W ERG7P38604 731 aa2.83□□□□□ -1.96
SWD3YBR175W RFC3P38629 340 aa2.83□□□□□ -1.96
SWD3YBR175W DED81P38707 554 aaKnown RBP2.83□□□□□ -1.96
SWD3YBR175W STN1P38960 494 aa2.83□□□□□ -1.96
SWD3YBR175W MIT1P40002 666 aa2.83□□□□□ -1.96
SWD3YBR175W SNM1P40993 198 aa2.83□□□□□ -1.96
SWD3YBR175W TFG2P41896 400 aaPredicted RBP2.83□□□□□ -1.96
SWD3YBR175W YGL242CP53066 181 aa2.83□□□□□ -1.96
SWD3YBR175W YGL114WP53134 725 aa2.83□□□□□ -1.96
SWD3YBR175W PIB2P53191 635 aa2.83□□□□□ -1.96
SWD3YBR175W CPR8P53728 308 aa2.83□□□□□ -1.96
SWD3YBR175W DUG3P53871 357 aa2.83□□□□□ -1.96
SWD3YBR175W APM1Q00776 475 aaPredicted RBP2.83□□□□□ -1.96
SWD3YBR175W SPO19Q03029 223 aa2.83□□□□□ -1.96
SWD3YBR175W YLR455WQ06188 304 aa2.83□□□□□ -1.96
SWD3YBR175W THI3Q07471 609 aa2.83□□□□□ -1.96
SWD3YBR175W YLR049CQ12110 428 aa2.83□□□□□ -1.96
SWD3YBR175W NCE102Q12207 173 aaRIP-Chip data2.83□□□□□ -1.96not detected
SWD3YBR175W LDB17Q12342 491 aa2.83□□□□□ -1.96
SWD3YBR175W RPN13O13563 156 aa2.82□□□□□ -1.96
SWD3YBR175W NFT1P0CE68 1218 aa2.82□□□□□ -1.96
SWD3YBR175W UGA1P17649 471 aa2.82□□□□□ -1.96
SWD3YBR175W SEC62P21825 274 aa2.82□□□□□ -1.96
SWD3YBR175W CLB2P24869 491 aa2.82□□□□□ -1.96
SWD3YBR175W HSP104P31539 908 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W NRP1P32770 719 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SWD3YBR175W YSC83P32792 385 aa2.82□□□□□ -1.96
SWD3YBR175W SOR1P35497 357 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W MIA40P36046 403 aa2.82□□□□□ -1.96
SWD3YBR175W BNA4P38169 460 aa2.82□□□□□ -1.96
SWD3YBR175W TCM62P38228 572 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W SPP381P38282 291 aaPredicted RBP2.82□□□□□ -1.96
SWD3YBR175W ARP1P38696 384 aa2.82□□□□□ -1.96
SWD3YBR175W RRP4P38792 359 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W SPC97P38863 823 aa2.82□□□□□ -1.96
SWD3YBR175W PCF11P39081 626 aaPredicted RBP2.82□□□□□ -1.96
SWD3YBR175W CDC1P40986 491 aa2.82□□□□□ -1.96
SWD3YBR175W TDA10P42938 290 aa2.82□□□□□ -1.96
SWD3YBR175W SNG1P46950 547 aa2.82□□□□□ -1.96
SWD3YBR175W TAX4P47030 604 aa2.82□□□□□ -1.96
SWD3YBR175W EMC2P47133 292 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W GTO1P48239 356 aa2.82□□□□□ -1.96
SWD3YBR175W KEL2P50090 882 aa2.82□□□□□ -1.96
SWD3YBR175W PYK2P52489 506 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W YGL185CP53100 379 aa2.82□□□□□ -1.96
SWD3YBR175W MND1P53102 219 aa2.82□□□□□ -1.96
SWD3YBR175W YGL117WP53133 265 aa2.82□□□□□ -1.96
SWD3YBR175W ZPR1P53303 486 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W DBP6P53734 629 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W STD1Q02794 444 aa2.82□□□□□ -1.96
SWD3YBR175W LGE1Q02796 332 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W ATC1Q04005 294 aa2.82□□□□□ -1.96
SWD3YBR175W SEG1Q04279 960 aa2.82□□□□□ -1.96
SWD3YBR175W ATG26Q06321 1198 aa2.82□□□□□ -1.96
SWD3YBR175W YPR078CQ06813 372 aa2.82□□□□□ -1.96
SWD3YBR175W SOR2Q07786 357 aa2.82□□□□□ -1.96
SWD3YBR175W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SWD3YBR175W SEC3P33332 1336 aaKnown RBP2.82□□□□□ -1.96
SWD3YBR175W SIN3P22579 1536 aa2.82□□□□□ -1.96
SWD3YBR175W SSK2P53599 1579 aa2.82□□□□□ -1.96
SWD3YBR175W YER145C-AA0A023PYF4 145 aa2.81□□□□□ -1.96
SWD3YBR175W RPL7AP05737 244 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W GPA1P08539 472 aa2.81□□□□□ -1.96
SWD3YBR175W SSA3P09435 649 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W THR4P16120 514 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W NUP1P20676 1076 aa2.81□□□□□ -1.96
SWD3YBR175W SPS22P25380 463 aa2.81□□□□□ -1.96
SWD3YBR175W RAD51P25454 400 aa2.81□□□□□ -1.96
SWD3YBR175W GID7P25569 745 aa2.81□□□□□ -1.96
SWD3YBR175W YCL068CP25593 260 aa2.81□□□□□ -1.96
SWD3YBR175W ATP11P32453 318 aa2.81□□□□□ -1.96
SWD3YBR175W PRP21P32524 280 aaPredicted RBP2.81□□□□□ -1.96
SWD3YBR175W RPC34P32910 317 aa2.81□□□□□ -1.96
SWD3YBR175W MSN2P33748 704 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms