RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	CHS6	P40955	746 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SHE3	YBR130C	MDV1	P47025	714 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	BRO1	P48582	844 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	YDR387C	Q04162	555 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	YLR281C	Q05863	155 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	VPS74	Q06385	345 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	THI20	Q08224	551 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	NRT1	Q08485	598 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	ADE4	P04046	510 aa	Known RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	AIM17	P23180	465 aa	Known RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	PTP1	P25044	335 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	RPS2	P25443	254 aa	Known RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	GEX1	P25596	615 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	ACH1	P32316	526 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	ECM25	P32525	599 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	KAP104	P38217	918 aa	Known RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	RFC3	P38629	340 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	CCT2	P39076	527 aa	Known RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	YIL089W	P40500	205 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	SAS2	P40963	338 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	TDA7	P53882	636 aa	Predicted RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	IRC15	Q02733	499 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	MGR3	Q04472	501 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	MDM30	Q05930	598 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	MRPL51	Q06090	140 aa	Predicted RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	DBP9	Q06218	594 aa	Known RBP	4.12	□□□□□ -1.75
SHE3	YBR130C	NDL1	Q06568	189 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	YLL056C	Q12177	298 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	UBX3	Q12229	455 aa		4.12	□□□□□ -1.75
SHE3	YBR130C	YAR066W	P0CX18	203 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	YHR214W	P0CX19	203 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	SEC63	P14906	663 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	BUB3	P26449	341 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	PHO91	P27514	894 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	SOR1	P35497	357 aa	Known RBP	4.11	□□□□□ -1.75
SHE3	YBR130C	KEL1	P38853	1164 aa	Known RBP	4.11	□□□□□ -1.75
SHE3	YBR130C	MLH1	P38920	769 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	ASN2	P49090	572 aa	Known RBP	4.11	□□□□□ -1.75
SHE3	YBR130C	ESBP6	P53918	673 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	BET4	Q00618	327 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	PNG1	Q02890	363 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	TAF12	Q03761	539 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	SOR2	Q07786	357 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	NSE1	Q07913	336 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	SGT1	Q08446	395 aa		4.11	□□□□□ -1.75
SHE3	YBR130C	ARO3	P14843	370 aa	Known RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	ALG1	P16661	449 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	CRM1	P30822	1084 aa	Known RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	NDI1	P32340	513 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	SMY1	P32364	656 aa	Known RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	RIM2	P38127	377 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	GND1	P38720	489 aa	Known RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	ISC1	P40015	477 aa	Known RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	GAT2	P40209	560 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	PCI8	P40512	444 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	PHO86	P46956	311 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	RPA34	P47006	233 aa	Predicted RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	AQR1	P53943	586 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	RPL15B	P54780	204 aa	Predicted RBP	4.1	□□□□□ -1.75
SHE3	YBR130C	STP1	Q00947	519 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	YMR254C	Q04838	102 aa		4.1	□□□□□ -1.75
SHE3	YBR130C	CDC21	P06785	304 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	RPL42A	P0CX27	106 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	RPL42B	P0CX28	106 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	YER190C-B	P0CX94	160 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	YEL077W-A	P0CX95	160 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	YGR296C-B	P0CX96	160 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	YPL283W-B	P0CX97	160 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	YPR204C-A	P0CX98	160 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	MDM10	P18409	493 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	RAD57	P25301	460 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	FAA1	P30624	700 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	SPC110	P32380	944 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	ERG1	P32476	496 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	CYS4	P32582	507 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	FRE1	P32791	686 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	ADH5	P38113	351 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	PAC11	P40960	533 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	AZF1	P41696	914 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	GAT1	P43574	510 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	TRS85	P46944	698 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	CUE3	P53137	624 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	PCP1	P53259	346 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	RRB1	Q04225	511 aa	Known RBP	4.09	□□□□□ -1.75
SHE3	YBR130C	BNA5	Q05979	453 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	MUM3	Q08750	479 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	REX3	Q12090	404 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	YDL009C	Q12210	107 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	RRD2	Q12461	358 aa		4.09	□□□□□ -1.75
SHE3	YBR130C	TAL1	P15019	335 aa	Known RBP	4.08	□□□□□ -1.76
SHE3	YBR130C	NIP1	P32497	812 aa	Known RBP	4.08	□□□□□ -1.76
SHE3	YBR130C	TRS65	P32893	560 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	FRE2	P36033	711 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	STN1	P38960	494 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	YIR014W	P40570	242 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	BNA3	P47039	444 aa	Known RBP	4.08	□□□□□ -1.76
SHE3	YBR130C	HMS2	P47175	358 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	SSN8	P47821	323 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	YIP1	P53039	248 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms