RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W YPS7Q06325 596 aa5.52□□□□□ -1.53
SHP1YBL058W RUD3Q12234 484 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W COR1P07256 457 aa5.51□□□□□ -1.53
SHP1YBL058W SSC1P0CS90 654 aaKnown RBP5.51□□□□□ -1.53
SHP1YBL058W GCY1P14065 312 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
SHP1YBL058W MSS116P15424 664 aaKnown RBP5.51□□□□□ -1.53
SHP1YBL058W DCG1P32460 244 aa5.51□□□□□ -1.53
SHP1YBL058W SPC42P36094 363 aa5.51□□□□□ -1.53
SHP1YBL058W OMA1P36163 345 aa5.51□□□□□ -1.53
SHP1YBL058W YBR062CP38239 180 aa5.51□□□□□ -1.53
SHP1YBL058W YBR071WP38243 211 aa5.51□□□□□ -1.53
SHP1YBL058W OM14P38325 134 aa5.51□□□□□ -1.53
SHP1YBL058W REI1P38344 393 aaPredicted RBP5.51□□□□□ -1.53
SHP1YBL058W CCT2P39076 527 aaKnown RBP5.51□□□□□ -1.53
SHP1YBL058W VPS52P39904 641 aa5.51□□□□□ -1.53
SHP1YBL058W MET12P46151 657 aa5.51□□□□□ -1.53
SHP1YBL058W BNA3P47039 444 aaKnown RBP5.51□□□□□ -1.53
SHP1YBL058W HSV2P50079 448 aaPredicted RBP5.51□□□□□ -1.53
SHP1YBL058W YDR209CQ03480 137 aa5.51□□□□□ -1.53
SHP1YBL058W MUS81Q04149 632 aaPredicted RBP5.51□□□□□ -1.53
SHP1YBL058W DAL4Q04895 635 aa5.51□□□□□ -1.53
SHP1YBL058W YOR376WQ08900 122 aa5.51□□□□□ -1.53
SHP1YBL058W KCS1Q12494 1050 aa5.51□□□□□ -1.53
SHP1YBL058W PAR32Q12515 295 aaKnown RBP5.51□□□□□ -1.53
SHP1YBL058W RMP1Q12530 201 aa5.51□□□□□ -1.53
SHP1YBL058W YOR032W-AQ8TGS1 66 aa5.51□□□□□ -1.53
SHP1YBL058W RGS2Q99188 309 aa5.51□□□□□ -1.53
SHP1YBL058W RPP1AP05318 106 aaPredicted RBP5.5□□□□□ -1.53
SHP1YBL058W HEM2P05373 342 aa5.5□□□□□ -1.53
SHP1YBL058W RPS31P05759 152 aaKnown RBP5.5□□□□□ -1.53
SHP1YBL058W LEU4P06208 619 aaKnown RBP5.5□□□□□ -1.53
SHP1YBL058W PHO2P07269 559 aa5.5□□□□□ -1.53
SHP1YBL058W CBF5P33322 483 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
SHP1YBL058W HES1P35843 434 aa5.5□□□□□ -1.53
SHP1YBL058W RRN3P36070 627 aa5.5□□□□□ -1.53
SHP1YBL058W RRP14P36080 434 aaKnown RBP5.5□□□□□ -1.53
SHP1YBL058W TDA11P38854 504 aa5.5□□□□□ -1.53
SHP1YBL058W SSP120P39931 234 aaKnown RBP5.5□□□□□ -1.53
SHP1YBL058W UTP25P40498 721 aaKnown RBP5.5□□□□□ -1.53
SHP1YBL058W VMA13P41807 478 aaKnown RBP5.5□□□□□ -1.53
SHP1YBL058W MIC19P43594 170 aa5.5□□□□□ -1.53
SHP1YBL058W YGL176CP46945 554 aa5.5□□□□□ -1.53
SHP1YBL058W STE24P47154 453 aa5.5□□□□□ -1.53
SHP1YBL058W ZIP2P53061 704 aa5.5□□□□□ -1.53
SHP1YBL058W SCW11P53189 542 aa5.5□□□□□ -1.53
SHP1YBL058W IBD2P53892 351 aa5.5□□□□□ -1.53
SHP1YBL058W YNL058CP53947 316 aa5.5□□□□□ -1.53
SHP1YBL058W RMI1Q02685 241 aa5.5□□□□□ -1.53
SHP1YBL058W GIP3Q03016 1276 aa5.5□□□□□ -1.53
SHP1YBL058W APC4Q04601 652 aa5.5□□□□□ -1.53
SHP1YBL058W YEH1Q07804 573 aa5.5□□□□□ -1.53
SHP1YBL058W SLP1Q12232 587 aa5.5□□□□□ -1.53
SHP1YBL058W RUP1Q12242 671 aa5.5□□□□□ -1.53
SHP1YBL058W YPR064WQ12492 139 aa5.5□□□□□ -1.53
SHP1YBL058W AI1P03875 834 aa5.49□□□□□ -1.53
SHP1YBL058W SPT3P06844 337 aa5.49□□□□□ -1.53
SHP1YBL058W VPS33P20795 691 aa5.49□□□□□ -1.53
SHP1YBL058W CDC39P25655 2108 aaKnown RBP5.49□□□□□ -1.53
SHP1YBL058W FUN30P31380 1131 aa5.49□□□□□ -1.53
SHP1YBL058W BYE1P36106 594 aa5.49□□□□□ -1.53
SHP1YBL058W RPC37P36121 282 aa5.49□□□□□ -1.53
SHP1YBL058W SEA4P38164 1038 aa5.49□□□□□ -1.53
SHP1YBL058W SAP1P39955 897 aaKnown RBP5.49□□□□□ -1.53
SHP1YBL058W YEL057CP39983 233 aa5.49□□□□□ -1.53
SHP1YBL058W SNO3P43544 222 aa5.49□□□□□ -1.53
SHP1YBL058W MAL11P53048 616 aa5.49□□□□□ -1.53
SHP1YBL058W EFM5P53200 248 aaKnown RBP5.49□□□□□ -1.53
SHP1YBL058W BIO4P53630 237 aa5.49□□□□□ -1.53
SHP1YBL058W BSC5P53755 489 aa5.49□□□□□ -1.53
SHP1YBL058W YMR155WQ03795 547 aa5.49□□□□□ -1.53
SHP1YBL058W PDR8Q06149 701 aa5.49□□□□□ -1.53
SHP1YBL058W CYK3Q07533 885 aa5.49□□□□□ -1.53
SHP1YBL058W REX4Q08237 289 aa5.49□□□□□ -1.53
SHP1YBL058W MDM32Q12171 622 aa5.49□□□□□ -1.53
SHP1YBL058W YRM1Q12340 786 aa5.49□□□□□ -1.53
SHP1YBL058W MHT1Q12525 324 aa5.49□□□□□ -1.53
SHP1YBL058W SGV1P23293 657 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W STP22P25604 385 aa5.48□□□□□ -1.53
SHP1YBL058W YCR090CP25654 182 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W PHA2P32452 334 aa5.48□□□□□ -1.53
SHP1YBL058W PET127P32606 800 aa5.48□□□□□ -1.53
SHP1YBL058W YKR078WP36158 585 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W MRPL16P38064 232 aa5.48□□□□□ -1.53
SHP1YBL058W OLA1P38219 394 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W YJL206CP39529 758 aa5.48□□□□□ -1.53
SHP1YBL058W TPA1P40032 644 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W PEP8P40335 379 aa5.48□□□□□ -1.53
SHP1YBL058W PRM2P40534 656 aa5.48□□□□□ -1.53
SHP1YBL058W PRM10P42946 383 aa5.48□□□□□ -1.53
SHP1YBL058W SPT20P50875 604 aa5.48□□□□□ -1.53
SHP1YBL058W YPT32P51996 222 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W AIF1P52923 378 aa5.48□□□□□ -1.53
SHP1YBL058W SDT1P53078 280 aa5.48□□□□□ -1.53
SHP1YBL058W MON1P53129 644 aa5.48□□□□□ -1.53
SHP1YBL058W RPN14P53196 417 aa5.48□□□□□ -1.53
SHP1YBL058W TAF11Q04226 346 aa5.48□□□□□ -1.53
SHP1YBL058W AHA1Q12449 350 aaKnown RBP5.48□□□□□ -1.53
SHP1YBL058W GCD2P12754 651 aaPredicted RBP5.47□□□□□ -1.53
SHP1YBL058W NPR1P22211 790 aa5.47□□□□□ -1.53
SHP1YBL058W MRPL25P23369 157 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms