RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W BET4Q00618 327 aa2.07□□□□□ -2.08
SNC1YAL030W LGE1Q02796 332 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W IZH1Q03419 316 aa2.07□□□□□ -2.08
SNC1YAL030W MRPL1Q04599 285 aa2.07□□□□□ -2.08
SNC1YAL030W YLR281CQ05863 155 aa2.07□□□□□ -2.08
SNC1YAL030W PHO92Q06390 306 aa2.07□□□□□ -2.08
SNC1YAL030W SOR2Q07786 357 aa2.07□□□□□ -2.08
SNC1YAL030W YLR112WQ12130 139 aa2.07□□□□□ -2.08
SNC1YAL030W CYB2P00175 591 aa2.06□□□□□ -2.08
SNC1YAL030W STF1P01098 86 aa2.06□□□□□ -2.08
SNC1YAL030W PDE2P06776 526 aa2.06□□□□□ -2.08
SNC1YAL030W ARO3P14843 370 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W YCP4P25349 247 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W RDS1P25611 832 aa2.06□□□□□ -2.08
SNC1YAL030W BUB3P26449 341 aa2.06□□□□□ -2.08
SNC1YAL030W PPZ1P26570 692 aa2.06□□□□□ -2.08
SNC1YAL030W FAA1P30624 700 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W ACH1P32316 526 aa2.06□□□□□ -2.08
SNC1YAL030W NDI1P32340 513 aa2.06□□□□□ -2.08
SNC1YAL030W SMY1P32364 656 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W ECM25P32525 599 aa2.06□□□□□ -2.08
SNC1YAL030W PDR3P33200 976 aa2.06□□□□□ -2.08
SNC1YAL030W YNK1P36010 153 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W CUE2P36075 443 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W SCO2P38072 301 aa2.06□□□□□ -2.08
SNC1YAL030W PCA1P38360 1216 aa2.06□□□□□ -2.08
SNC1YAL030W RRP3P38712 501 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W OSH3P38713 996 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W SPC97P38863 823 aa2.06□□□□□ -2.08
SNC1YAL030W GAT2P40209 560 aa2.06□□□□□ -2.08
SNC1YAL030W TRS85P46944 698 aa2.06□□□□□ -2.08
SNC1YAL030W PHO86P46956 311 aa2.06□□□□□ -2.08
SNC1YAL030W RPA34P47006 233 aaPredicted RBP2.06□□□□□ -2.08
SNC1YAL030W BNA3P47039 444 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W ASN2P49090 572 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W SHE4P51534 789 aa2.06□□□□□ -2.08
SNC1YAL030W ESBP6P53918 673 aa2.06□□□□□ -2.08
SNC1YAL030W ADA2Q02336 434 aa2.06□□□□□ -2.08
SNC1YAL030W RRB1Q04225 511 aaKnown RBP2.06□□□□□ -2.08
SNC1YAL030W VPS74Q06385 345 aa2.06□□□□□ -2.08
SNC1YAL030W NSE1Q07913 336 aa2.06□□□□□ -2.08
SNC1YAL030W YEH2Q07950 538 aa2.06□□□□□ -2.08
SNC1YAL030W SGT1Q08446 395 aa2.06□□□□□ -2.08
SNC1YAL030W REX3Q12090 404 aa2.06□□□□□ -2.08
SNC1YAL030W YDL009CQ12210 107 aa2.06□□□□□ -2.08
SNC1YAL030W YDR061WQ12298 539 aa2.06□□□□□ -2.08
SNC1YAL030W PSY3Q12318 242 aa2.06□□□□□ -2.08
SNC1YAL030W DAL5P15365 543 aa2.05□□□□□ -2.08
SNC1YAL030W ALG1P16661 449 aa2.05□□□□□ -2.08
SNC1YAL030W UBA1P22515 1024 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W RPI1P23250 407 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W RAD57P25301 460 aa2.05□□□□□ -2.08
SNC1YAL030W CTR86P25355 563 aa2.05□□□□□ -2.08
SNC1YAL030W MGR1P25573 417 aa2.05□□□□□ -2.08
SNC1YAL030W PHO91P27514 894 aa2.05□□□□□ -2.08
SNC1YAL030W RIM1P32445 135 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W APE2P32454 952 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W ERG1P32476 496 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W FRE1P32791 686 aa2.05□□□□□ -2.08
SNC1YAL030W PFF1P38244 976 aa2.05□□□□□ -2.08
SNC1YAL030W PES4P39684 611 aa2.05□□□□□ -2.08
SNC1YAL030W YAL037WP39728 267 aa2.05□□□□□ -2.08
SNC1YAL030W PCI8P40512 444 aa2.05□□□□□ -2.08
SNC1YAL030W YIR014WP40570 242 aa2.05□□□□□ -2.08
SNC1YAL030W ELP2P42935 788 aa2.05□□□□□ -2.08
SNC1YAL030W MDE1P47095 244 aa2.05□□□□□ -2.08
SNC1YAL030W EFM3P47163 339 aa2.05□□□□□ -2.08
SNC1YAL030W BRO1P48582 844 aa2.05□□□□□ -2.08
SNC1YAL030W GPI15P53961 229 aa2.05□□□□□ -2.08
SNC1YAL030W PRO2P54885 456 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W SEC5P89102 971 aa2.05□□□□□ -2.08
SNC1YAL030W PNG1Q02890 363 aa2.05□□□□□ -2.08
SNC1YAL030W PRP3Q03338 469 aaPredicted RBP2.05□□□□□ -2.08
SNC1YAL030W URH1Q04179 340 aa2.05□□□□□ -2.08
SNC1YAL030W YMR254CQ04838 102 aa2.05□□□□□ -2.08
SNC1YAL030W MRPL51Q06090 140 aaPredicted RBP2.05□□□□□ -2.08
SNC1YAL030W NOP6Q07623 225 aaKnown RBP2.05□□□□□ -2.08
SNC1YAL030W MLH2Q07980 695 aa2.05□□□□□ -2.08
SNC1YAL030W BSC1Q12140 328 aa2.05□□□□□ -2.08
SNC1YAL030W UBX3Q12229 455 aa2.05□□□□□ -2.08
SNC1YAL030W ATG34Q12292 412 aa2.05□□□□□ -2.08
SNC1YAL030W RKM5Q12367 367 aa2.05□□□□□ -2.08
SNC1YAL030W ILV5P06168 395 aaKnown RBP2.04□□□□□ -2.08
SNC1YAL030W TAL1P15019 335 aaKnown RBP2.04□□□□□ -2.08
SNC1YAL030W PRP16P15938 1071 aaPredicted RBP2.04□□□□□ -2.08
SNC1YAL030W SEC62P21825 274 aa2.04□□□□□ -2.08
SNC1YAL030W CRM1P30822 1084 aaKnown RBP2.04□□□□□ -2.08
SNC1YAL030W NRP1P32770 719 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
SNC1YAL030W SRB2P34162 210 aa2.04□□□□□ -2.08
SNC1YAL030W INM1P38710 295 aa2.04□□□□□ -2.08
SNC1YAL030W GPI16P38875 610 aa2.04□□□□□ -2.08
SNC1YAL030W FLO5P38894 1075 aa2.04□□□□□ -2.08
SNC1YAL030W PCF11P39081 626 aaPredicted RBP2.04□□□□□ -2.08
SNC1YAL030W YIL152WP40455 235 aa2.04□□□□□ -2.08
SNC1YAL030W PAC11P40960 533 aa2.04□□□□□ -2.08
SNC1YAL030W GAT1P43574 510 aa2.04□□□□□ -2.08
SNC1YAL030W MDV1P47025 714 aa2.04□□□□□ -2.08
SNC1YAL030W SSN8P47821 323 aa2.04□□□□□ -2.08
SNC1YAL030W GPI8P49018 411 aa2.04□□□□□ -2.08
SNC1YAL030W YIP1P53039 248 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms