RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 MTMR8Q96EF0 704 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 MROH8Q9H579 483 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 CNTNAP5Q8WYK1 1306 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 hCG_1642624A0A1W2PR95 340 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 MUM1L1Q5H9M0 696 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 TRIM65Q6PJ69 517 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 VSTM4Q8IW00 320 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 RNF146Q9NTX7 359 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 RBM28Q9NW13 759 aaKnown RBP17.41■□□□□ 0.38
CLN8-209ENST00000635970 HOOK1Q9UJC3 728 aaKnown RBP17.41■□□□□ 0.38
CLN8-209ENST00000635970 GJD2Q9UKL4 321 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 PTCH2Q9Y6C5 1203 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 IVNS1ABPQ9Y6Y0 642 aa17.41■□□□□ 0.38
CLN8-209ENST00000635970 SERPINC1P01008 464 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 GNRH1P01148 92 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 PTPREP23469 700 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 RCAN1P53805 252 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 GRB14Q14449 540 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 ARHGEF6Q15052 776 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 MORN1Q5T089 497 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 TRERF1Q96PN7 1200 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.4■□□□□ 0.38
CLN8-209ENST00000635970 ZBTB5O15062 677 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 PPFIA3O75145 1194 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 TADA3O75528 432 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 ADORA2AP29274 412 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 GNAQP50148 359 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
CLN8-209ENST00000635970 MCOLN1Q9GZU1 580 aa17.4■□□□□ 0.38
CLN8-209ENST00000635970 HOXD10P28358 340 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 FUT2Q10981 343 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 REXO1L1PQ8IX06 675 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 GPR161Q8N6U8 529 aaKnown RBP17.39■□□□□ 0.37
CLN8-209ENST00000635970 MMP19Q99542 508 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 NUDT12Q9BQG2 462 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 HSD3B7Q9H2F3 369 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
CLN8-209ENST00000635970 NFIBO00712 420 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 PGK2P07205 417 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 FCER1AP12319 257 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 CYP2B6P20813 491 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 COPB2P35606 906 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 FBXO11Q86XK2 927 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 SOCS4Q8WXH5 440 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 USP6NLQ92738 828 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 TSPYL1Q9H0U9 437 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 ACAD9Q9H845 621 aa17.39■□□□□ 0.37
CLN8-209ENST00000635970 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 BIN1O00499 593 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 STX10O60499 249 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 CUTAO60888 179 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 TUBB4BP68371 445 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 CHST13Q8NET6 341 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 RAET1EQ8TD07 263 aa17.38■□□□□ 0.37
CLN8-209ENST00000635970 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
CLN8-209ENST00000635970 COBLO75128 1261 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 ELNP15502 786 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 SMARCA1P28370 1054 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 PLA2G4AP47712 749 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 MAP2K5Q13163 448 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 KCTD2Q14681 263 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 RESP18Q5W5W9 173 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 FBXO46Q6PJ61 603 aaPredicted RBP17.37■□□□□ 0.37
CLN8-209ENST00000635970 CLEC4DQ8WXI8 215 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 PHKBQ93100 1093 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 AMNQ9BXJ7 453 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 A1CFQ9NQ94 594 aaKnown RBP17.37■□□□□ 0.37
CLN8-209ENST00000635970 FBXO40Q9UH90 709 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 DACH1Q9UI36 760 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 MCM3APO60318 1980 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 STRNO43815 780 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 URI1O94763 535 aaPredicted RBP17.37■□□□□ 0.37
CLN8-209ENST00000635970 RGS2P41220 211 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 GPS2Q13227 327 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 NTRK3Q16288 839 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 CCL14Q16627 93 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 NSMFQ6X4W1 530 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 ANKRD35Q8N283 1001 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 UBXN6Q9BZV1 441 aa17.37■□□□□ 0.37
CLN8-209ENST00000635970 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
CLN8-209ENST00000635970 CCDC196A0A1B0GTZ2 297 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 CASQ1P31415 396 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 PRMT2P55345 433 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 SLC20A2Q08357 652 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 ABRAQ8N0Z2 381 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 TXLNBQ8N3L3 684 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 APBA2Q99767 749 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 PCDHA1Q9Y5I3 950 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 ABCB11O95342 1321 aa17.36■□□□□ 0.37
CLN8-209ENST00000635970 KIF28PB7ZC32 967 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 ADCY3O60266 1144 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 TBX2Q13207 712 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1734.9 ms