RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 IQCF3P0C7M6 154 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
UBR1-212ENST00000627960 EXOSC10Q01780 885 aaKnown RBP13.97□□□□□ -0.17
UBR1-212ENST00000627960 GRIN2CQ14957 1233 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 HSDL1Q3SXM5 330 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 TSGA10IPQ3SY00 556 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 DEFB128Q7Z7B8 93 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 SMARCC2Q8TAQ2 1214 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 CUL5Q93034 780 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 SPATA33Q96N06 139 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 NEK1Q96PY6 1258 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 ALG1Q9BT22 464 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 KATNAL1Q9BW62 490 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 ZNF576Q9H609 170 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 HDAC6Q9UBN7 1215 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 SORBS3O60504 671 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 ZNF286BP0CG31 522 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 ICAM3P32942 547 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 MFSD10Q14728 455 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 RAB30Q15771 203 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 TMTC3Q6ZXV5 915 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 CCDC155Q8N6L0 562 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 C7orf31Q8N865 590 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 MLXIPQ9HAP2 919 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 MSRAQ9UJ68 235 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 SLC4A7Q9Y6M7 1214 aa13.96□□□□□ -0.17
UBR1-212ENST00000627960 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 ACTN1P12814 892 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 FOSL2P15408 326 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 PCNX4Q63HM2 1172 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 XRRA1Q6P2D8 792 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 SYNE3Q6ZMZ3 975 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 DHX32Q7L7V1 743 aaKnown RBP13.95□□□□□ -0.18
UBR1-212ENST00000627960 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
UBR1-212ENST00000627960 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
UBR1-212ENST00000627960 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
UBR1-212ENST00000627960 BCAS3Q9H6U6 928 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 RTEL1Q9NZ71 1219 aa13.95□□□□□ -0.18
UBR1-212ENST00000627960 hCG_1642624A0A1W2PR95 340 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 ZBBXA8MT70 800 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 FIBPO43427 364 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 RBL2Q08999 1139 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 SEMA3FQ13275 785 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 NEDD9Q14511 834 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 KRT32Q14532 448 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 ADCK5Q3MIX3 580 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 TCEANC2Q96MN5 208 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 NKX2-4Q9H2Z4 354 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 YBX2Q9Y2T7 364 aaKnown RBP13.94□□□□□ -0.18
UBR1-212ENST00000627960 CHD9Q3L8U1 2897 aa13.94□□□□□ -0.18
UBR1-212ENST00000627960 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 DLL1O00548 723 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 SELPP16109 830 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 RABGGTBP53611 331 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 PTK7Q13308 1070 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 GPNMBQ14956 572 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 APOA5Q6Q788 366 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 METTL7BQ6UX53 244 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBR1-212ENST00000627960 FTOQ9C0B1 505 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBR1-212ENST00000627960 SLC28A3Q9HAS3 691 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 RBM28Q9NW13 759 aaKnown RBP13.93□□□□□ -0.18
UBR1-212ENST00000627960 BRPF3Q9ULD4 1205 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 PCDHA11Q9Y5I1 949 aa13.93□□□□□ -0.18
UBR1-212ENST00000627960 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 H3BRB1 525 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
UBR1-212ENST00000627960 CKBP12277 381 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 ATP2A2P16615 1042 aaKnown RBP13.92□□□□□ -0.18
UBR1-212ENST00000627960 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
UBR1-212ENST00000627960 HIC1Q14526 733 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 TRIM71Q2Q1W2 868 aaKnown RBP13.92□□□□□ -0.18
UBR1-212ENST00000627960 LRRC8DQ7L1W4 858 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 CYFIP1Q7L576 1253 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 NLRX1Q86UT6 975 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 KCNB2Q92953 911 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 GPR20Q99678 358 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 SENP7Q9BQF6 1050 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
UBR1-212ENST00000627960 CDH23Q9H251 3354 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 PTPRSQ13332 1948 aa13.92□□□□□ -0.18
UBR1-212ENST00000627960 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
UBR1-212ENST00000627960 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
UBR1-212ENST00000627960 ZBTB43O43298 467 aa13.91□□□□□ -0.18
UBR1-212ENST00000627960 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
UBR1-212ENST00000627960 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms