RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 COASYQ13057 564 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 PSMD2Q13200 908 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 TBC1D16Q8TBP0 767 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 HAS1Q92839 578 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 DNAJC19Q96DA6 116 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 OSBPL9Q96SU4 736 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 PNMA6FA0A0J9YX94 578 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 TRAF5O00463 557 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 PRPF6O94906 941 aaKnown RBP12.47□□□□□ -0.41
VARS2-213ENST00000625423 RASSF7Q02833 373 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 GABPAQ06546 454 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 CCDC70Q6NSX1 233 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 SPATA4Q8NEY3 305 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 TBC1D22AQ8WUA7 517 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 LRRC27Q9C0I9 530 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 DMGDHQ9UI17 866 aaKnown RBP12.47□□□□□ -0.41
VARS2-213ENST00000625423 BTAF1O14981 1849 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 ZNF543Q08ER8 600 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 CRY2Q49AN0 593 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 FOXR1Q6PIV2 292 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
VARS2-213ENST00000625423 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
VARS2-213ENST00000625423 FGFBP2Q9BYJ0 223 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
VARS2-213ENST00000625423 PANK4Q9NVE7 773 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 LCMT1Q9UIC8 334 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 PLIN4Q96Q06 1357 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 IGKV6D-41A0A0C4DH26 115 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 BUB1O43683 1085 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 TTLL1O95922 423 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 PRLRP16471 622 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
VARS2-213ENST00000625423 CCDC40Q4G0X9 1142 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 TDRD12Q587J7 1177 aaKnown RBP12.46□□□□□ -0.41
VARS2-213ENST00000625423 AFAP1L1Q8TED9 768 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
VARS2-213ENST00000625423 AGPSO00116 658 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 SLC1A4P43007 532 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 CLK2P49760 499 aaKnown RBP12.46□□□□□ -0.42
VARS2-213ENST00000625423 FKBP3Q00688 224 aaKnown RBP12.46□□□□□ -0.42
VARS2-213ENST00000625423 SLC7A5Q01650 507 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 HGSNATQ68CP4 663 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.42
VARS2-213ENST00000625423 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 MTMR8Q96EF0 704 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 KANSL2Q9H9L4 492 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.42
VARS2-213ENST00000625423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
VARS2-213ENST00000625423 E9PMD0 336 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 TRIM37O94972 964 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 TCP1P17987 556 aaKnown RBP12.45□□□□□ -0.42
VARS2-213ENST00000625423 NAP1L1P55209 391 aaKnown RBP12.45□□□□□ -0.42
VARS2-213ENST00000625423 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
VARS2-213ENST00000625423 CCDC181Q5TID7 509 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 PROM2Q8N271 834 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
VARS2-213ENST00000625423 CUL5Q93034 780 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 USP17L10C9JJH3 530 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 PJA2O43164 708 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 SERPINB2P05120 415 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 APBA1Q02410 837 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 ZNF572Q7Z3I7 529 aaPredicted RBP12.45□□□□□ -0.42
VARS2-213ENST00000625423 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
VARS2-213ENST00000625423 NPHP3-ACAD11A0A0J9YXS1 232 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 NOL4O94818 638 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 IVLP07476 585 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 LRRC31Q6UY01 552 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
VARS2-213ENST00000625423 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 SSU72P8A0A1W2PR75 194 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 TLR2O60603 784 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 RPS6KA5O75582 802 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 ITIH3Q06033 890 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 NOX5Q96PH1 765 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 LSM14BQ9BX40 385 aaKnown RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 TLR10Q9BXR5 811 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 LRRC4BQ9NT99 713 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 PODXL2Q9NZ53 605 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 SERPINB13Q9UIV8 391 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms