RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 APC2O95996 2303 aa7.96□□□□□ -1.13
CDKL5-204ENST00000623364 PDE8BO95263 885 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 WISP1O95388 367 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 CPT1AP50416 773 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 NONOQ15233 471 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDKL5-204ENST00000623364 IQSEC1Q6DN90 963 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 ATF7IPQ6VMQ6 1270 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.96□□□□□ -1.14
CDKL5-204ENST00000623364 METTL16Q86W50 562 aaKnown RBP7.96□□□□□ -1.14
CDKL5-204ENST00000623364 DBF4BQ8NFT6 615 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 PPP1R13LQ8WUF5 828 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 KCNK12Q9HB15 430 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 GNL3LQ9NVN8 582 aaKnown RBP7.96□□□□□ -1.14
CDKL5-204ENST00000623364 CDH22Q9UJ99 828 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 METRNQ9UJH8 293 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 SCN10AQ9Y5Y9 1956 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 ADGRA3Q8IWK6 1321 aa7.96□□□□□ -1.14
CDKL5-204ENST00000623364 POLQO75417 2590 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 CAPN9O14815 690 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 NARSO43776 548 aaKnown RBP7.95□□□□□ -1.14
CDKL5-204ENST00000623364 HYAL3O43820 417 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-204ENST00000623364 EOMESO95936 686 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 CAPNS1P04632 268 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 PTGS1P23219 599 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 NRLP54845 237 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 LMOD3Q0VAK6 560 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 BTG3Q14201 252 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-204ENST00000623364 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-204ENST00000623364 KIAA1211LQ6NV74 962 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 SLC4A10Q6U841 1118 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 FAM133AQ8N9E0 248 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 SPIRE2Q8WWL2 714 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 ARHGEF3Q9NR81 526 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 IGSF9Q9P2J2 1179 aa7.95□□□□□ -1.14
CDKL5-204ENST00000623364 MIA3Q5JRA6 1907 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 FAM221BA6H8Z2 402 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 FAM205CA6NFA0 338 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 SEMA3EO15041 775 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 TREHO43280 583 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 KPNA6O60684 536 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 LILRB3O75022 631 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 C7P10643 843 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 MAGEA9P43362 315 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 CHMP4BP1P59074 171 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 CNGB1Q14028 1251 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 PUM3Q15397 648 aaKnown RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 SF3A2Q15428 464 aaKnown RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 COLEC12Q5KU26 742 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 TMEM63BQ5T3F8 832 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 SPTY2D1Q68D10 685 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 OTOP3Q7RTS5 596 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 TEX11Q8IYF3 940 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 KLHL23Q8NBE8 558 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 SEPT8Q92599 483 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 DHX38Q92620 1227 aaKnown RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 SHDQ96IW2 340 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 PLEKHF1Q96S99 279 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 GPR20Q99678 358 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 FOXQ1Q9C009 403 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 CABP5Q9NP86 173 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 KLK13Q9UKR3 277 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 PATJQ8NI35 1801 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 COL12A1Q99715 3063 aa7.94□□□□□ -1.14
CDKL5-204ENST00000623364 URB1O60287 2271 aaKnown RBP7.94□□□□□ -1.14
CDKL5-204ENST00000623364 COL6A6A6NMZ7 2263 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 LRRN2O75325 713 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 CEACAM1P13688 526 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 RIPK4P57078 832 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 KCNC3Q14003 757 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 SIM2Q14190 667 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-204ENST00000623364 MBTPS1Q14703 1052 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 ATAT1Q5SQI0 421 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 SH3PXD2AQ5TCZ1 1133 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 PDE12Q6L8Q7 609 aaKnown RBP7.93□□□□□ -1.14
CDKL5-204ENST00000623364 DCLRE1AQ6PJP8 1040 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 TSSK4Q6SA08 328 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 RASGRP4Q8TDF6 673 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 PNNQ9H307 717 aaKnown RBP7.93□□□□□ -1.14
CDKL5-204ENST00000623364 ABCF2Q9UG63 623 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 DENND2AQ9ULE3 1009 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 SIPA1L1O43166 1804 aa7.93□□□□□ -1.14
CDKL5-204ENST00000623364 PYCARD-AS1I3L0S3 204 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 ATMINO43313 823 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-204ENST00000623364 HLA-DOAP06340 250 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 LDHCP07864 332 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 SRFP11831 508 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 GP1BBP13224 206 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 SCAPQ12770 1279 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 ABCB5Q2M3G0 1257 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 KRTAP21-3Q3LHN1 58 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 PLEKHG4Q58EX7 1191 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 ZNF618Q5T7W0 954 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 RNF43Q68DV7 783 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 MAMSTRQ6ZN01 415 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 ANKRD35Q8N283 1001 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 VGLL2Q8N8G2 317 aa7.92□□□□□ -1.14
CDKL5-204ENST00000623364 CASP10Q92851 521 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms