RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
DKC1-213ENST00000620277 KRT25Q7Z3Z0 450 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 FAM169AQ9Y6X4 670 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 C6orf229H3BNL8 230 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 SCNN1DP51172 638 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 KCNMA1Q12791 1236 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
DKC1-213ENST00000620277 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 PPANQ9NQ55 473 aaKnown RBP17.72■□□□□ 0.43
DKC1-213ENST00000620277 A0A087X0T9 212 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 KCNK3O14649 394 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 UFL1O94874 794 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 FAM228BP0C875 321 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 MAN2A1Q16706 1144 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 KLHDC7AQ5VTJ3 777 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 NOX5Q96PH1 765 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
DKC1-213ENST00000620277 H0YHG0 523 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 MCM3P25205 808 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 CACNB3P54284 484 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 CFAP58Q5T655 872 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 C7orf25Q9BPX7 421 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 TSPYL1Q9H0U9 437 aa17.71■□□□□ 0.43
DKC1-213ENST00000620277 MKRN1Q9UHC7 482 aaKnown RBP17.71■□□□□ 0.43
DKC1-213ENST00000620277 ITGB4P16144 1822 aa17.71■□□□□ 0.42
DKC1-213ENST00000620277 POTEB3A0JP26 581 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 POTECB2RU33 542 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 TLR2O60603 784 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 MAGEA9P43362 315 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 GTF2A1P52655 376 aaPredicted RBP17.7■□□□□ 0.42
DKC1-213ENST00000620277 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 TMEM266Q2M3C6 531 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 GJB7Q6PEY0 223 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 POTEBQ6S5H4 581 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 GPATCH11Q8N954 259 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 AENQ8WTP8 325 aaKnown RBP17.7■□□□□ 0.42
DKC1-213ENST00000620277 PANK4Q9NVE7 773 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 CEP104O60308 925 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 COPB2P35606 906 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 KLHL30Q0D2K2 578 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 ERGIC2Q96RQ1 377 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 SMIM23A6NLE4 172 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 PRPF4BQ13523 1007 aaKnown RBP17.7■□□□□ 0.42
DKC1-213ENST00000620277 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 CENPPQ6IPU0 288 aa17.7■□□□□ 0.42
DKC1-213ENST00000620277 SHTN1A0MZ66 631 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 AARSP49588 968 aaKnown RBP eCLIP17.69■□□□□ 0.42
DKC1-213ENST00000620277 SFMBT2Q5VUG0 894 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.69■□□□□ 0.42
DKC1-213ENST00000620277 CLIC2O15247 247 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 PCP11498 1178 aaKnown RBP17.69■□□□□ 0.42
DKC1-213ENST00000620277 AKR1B1P15121 316 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 SLC9A1P19634 815 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 CORO7P57737 925 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 TUBB4BP68371 445 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 CEP85LQ5SZL2 805 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 MYOCDQ8IZQ8 938 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 UHMK1Q8TAS1 419 aaKnown RBP17.69■□□□□ 0.42
DKC1-213ENST00000620277 BAP1Q92560 729 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 RNPC3Q96LT9 517 aaKnown RBP17.69■□□□□ 0.42
DKC1-213ENST00000620277 TSG101Q99816 390 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 SEPT11Q9NVA2 429 aaKnown RBP17.69■□□□□ 0.42
DKC1-213ENST00000620277 CACNA1SQ13698 1873 aa17.69■□□□□ 0.42
DKC1-213ENST00000620277 TUBBP07437 444 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 ADCY7P51828 1080 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 TCP10Q12799 353 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 COASYQ13057 564 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 TSGA10Q9BZW7 698 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 RTCBQ9Y3I0 505 aaKnown RBP17.68■□□□□ 0.42
DKC1-213ENST00000620277 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
DKC1-213ENST00000620277 ANO9A1A5B4 782 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 GTF2IP78347 998 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 IKQ13123 557 aaPredicted RBP17.68■□□□□ 0.42
DKC1-213ENST00000620277 PABPC4Q13310 644 aaKnown RBP eCLIP17.68■□□□□ 0.421e-8■■■■■ 27.9
DKC1-213ENST00000620277 SLC9C1Q4G0N8 1177 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 PDXDC1Q6P996 788 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 RETREG2Q8NC44 543 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 KAT2BQ92831 832 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 SPAG5Q96R06 1193 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 CHORDC1Q9UHD1 332 aaPredicted RBP17.68■□□□□ 0.42
DKC1-213ENST00000620277 DCCP43146 1447 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 TARSL2A2RTX5 802 aaKnown RBP17.68■□□□□ 0.42
DKC1-213ENST00000620277 POTEFA5A3E0 1075 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 USP17L10C9JJH3 530 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 MYO1FO00160 1098 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 POTEIP0CG38 1075 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 CFAP221Q4G0U5 840 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 FAM26FQ5R3K3 315 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 POTEGQ6S5H5 508 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 POTEEQ6S8J3 1075 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 UNC13DQ70J99 1090 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 KSR1Q8IVT5 923 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 ANKRD2Q9GZV1 360 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 DDX47Q9H0S4 455 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms