RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.65■□□□□ 0.42
MUC1-228ENST00000620103 CHD7Q9P2D1 2997 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 PPFIA4O75335 1185 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 SP2Q02086 613 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 PTGISQ16647 500 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 SKAP1Q86WV1 359 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 RETREG2Q8NC44 543 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 CAGE1Q8TC20 777 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 RRP36Q96EU6 259 aaKnown RBP17.65■□□□□ 0.42
MUC1-228ENST00000620103 INPP4AQ96PE3 977 aaPredicted RBP17.65■□□□□ 0.42
MUC1-228ENST00000620103 ANO2Q9NQ90 1003 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 RRAGDQ9NQL2 400 aaPredicted RBP17.65■□□□□ 0.42
MUC1-228ENST00000620103 GTF2IRD1Q9UHL9 959 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 MSRAQ9UJ68 235 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 SLC4A7Q9Y6M7 1214 aa17.65■□□□□ 0.42
MUC1-228ENST00000620103 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
MUC1-228ENST00000620103 STAM2O75886 525 aa17.64■□□□□ 0.41
MUC1-228ENST00000620103 UBA1P22314 1058 aaKnown RBP17.64■□□□□ 0.41
MUC1-228ENST00000620103 PSEN2P49810 448 aa17.64■□□□□ 0.41
MUC1-228ENST00000620103 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
MUC1-228ENST00000620103 HSDL1Q3SXM5 330 aa17.64■□□□□ 0.41
MUC1-228ENST00000620103 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
MUC1-228ENST00000620103 KATNAL1Q9BW62 490 aa17.64■□□□□ 0.41
MUC1-228ENST00000620103 NOD1Q9Y239 953 aa17.64■□□□□ 0.41
MUC1-228ENST00000620103 PIK3CDO00329 1044 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 GGPS1O95749 300 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 CALM1P0DP23 149 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 CALM2P0DP24 149 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 CALM3P0DP25 149 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 ICAM3P32942 547 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 BECN1Q14457 450 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 DEFB128Q7Z7B8 93 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 PIBF1Q8WXW3 757 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 DHX38Q92620 1227 aaKnown RBP17.63■□□□□ 0.41
MUC1-228ENST00000620103 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
MUC1-228ENST00000620103 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 YBX2Q9Y2T7 364 aaKnown RBP17.63■□□□□ 0.41
MUC1-228ENST00000620103 CCDC69A6NI79 296 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 MEIS2O14770 477 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 ZNF286BP0CG31 522 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 CHMP4BP1P59074 171 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 MFSD10Q14728 455 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 NFXL1Q6ZNB6 911 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 CCDC155Q8N6L0 562 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 AFAP1L1Q8TED9 768 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 ZFP91Q96JP5 570 aaPredicted RBP17.63■□□□□ 0.41
MUC1-228ENST00000620103 SPATA33Q96N06 139 aa17.63■□□□□ 0.41
MUC1-228ENST00000620103 VCANP13611 3396 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 SCN5AQ14524 2016 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 GPNMBQ14956 572 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 KIAA0753Q2KHM9 967 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 C7orf31Q8N865 590 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 C16orf70Q9BSU1 422 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 SEC63Q9UGP8 760 aaKnown RBP17.62■□□□□ 0.41
MUC1-228ENST00000620103 PCDHA11Q9Y5I1 949 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 TANC1Q9C0D5 1861 aa17.62■□□□□ 0.41
MUC1-228ENST00000620103 ZBBXA8MT70 800 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 SPATA31C2B4DYI2 1134 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
MUC1-228ENST00000620103 ACTN1P12814 892 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 ATP2A2P16615 1042 aaKnown RBP17.61■□□□□ 0.41
MUC1-228ENST00000620103 SEMA3FQ13275 785 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 GNPTABQ3T906 1256 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 XRRA1Q6P2D8 792 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 NKX2-4Q9H2Z4 354 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 SLC12A7Q9Y666 1083 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 TET1Q8NFU7 2136 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 SELPP16109 830 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 RXRAP19793 462 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 CLCN1P35523 988 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 PTK7Q13308 1070 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 RNF20Q5VTR2 975 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 PCNX4Q63HM2 1172 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 FANCBQ8NB91 859 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 PHOSPHO2Q8TCD6 241 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 PRDM12Q9H4Q4 367 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 BCAS3Q9H6U6 928 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 SLC28A3Q9HAS3 691 aa17.61■□□□□ 0.41
MUC1-228ENST00000620103 MYH7BA7E2Y1 1941 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 FIBPO43427 364 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 PARNO95453 639 aaKnown RBP17.6■□□□□ 0.41
MUC1-228ENST00000620103 HOXC8P31273 242 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 RABGGTBP53611 331 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 EXOSC10Q01780 885 aaKnown RBP17.6■□□□□ 0.41
MUC1-228ENST00000620103 TRIM71Q2Q1W2 868 aaKnown RBP17.6■□□□□ 0.41
MUC1-228ENST00000620103 CMTR1Q8N1G2 835 aaKnown RBP17.6■□□□□ 0.41
MUC1-228ENST00000620103 SMARCC2Q8TAQ2 1214 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 CUL5Q93034 780 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 MLXIPQ9HAP2 919 aa17.6■□□□□ 0.41
MUC1-228ENST00000620103 CXCL10P02778 98 aa17.59■□□□□ 0.41
MUC1-228ENST00000620103 CKBP12277 381 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms