RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 MCM7P33993 719 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 SEMA3FQ13275 785 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 MTMR1Q13613 665 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 TTLL4Q14679 1199 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 Q4G0T1 1027 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 RILPL1Q5EBL4 403 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 TMEM63BQ5T3F8 832 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 IQSEC1Q6DN90 963 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 MBOAT7Q96N66 472 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 HMX1Q9NP08 348 aaPredicted RBP17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 KCNH7Q9NS40 1196 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 PKD2L1Q9P0L9 805 aa17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 DDX41Q9UJV9 622 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-204ENST00000617222 MAFGO15525 162 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 SLC37A4O43826 429 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 TXNP10599 105 aaKnown RBP17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 SMPD1P17405 629 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 TNFAIP2Q03169 654 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 MTFR1Q15390 333 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 CCDC62Q6P9F0 684 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 KCNV1Q6PIU1 500 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 LENG9Q96B70 501 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 UNC93B1Q9H1C4 597 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 PCDHB6Q9Y5E3 794 aa17.72■□□□□ 0.43
PCDHGC3-204ENST00000617222 SEPT4O43236 478 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 ATP9AO75110 1047 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 TGFB3P10600 412 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 AKR1A1P14550 325 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 SETQ01105 290 aaPredicted RBP17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 SP2Q02086 613 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 ANO1Q5XXA6 986 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 COPS5Q92905 334 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 ARMC5Q96C12 935 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 ZNF333Q96JL9 665 aa17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
PCDHGC3-204ENST00000617222 MCM3APO60318 1980 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 MSH4O15457 936 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 ADCY6O43306 1168 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 SORBS3O60504 671 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 CCL5P13501 91 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 PTGS1P23219 599 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 DUSP28Q4G0W2 176 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 LENG1Q96BZ8 264 aaPredicted RBP17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 ZNF577Q9BSK1 485 aa17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.7■□□□□ 0.42
PCDHGC3-204ENST00000617222 MARCH6O60337 910 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 KCNA2P16389 499 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 UBA1P22314 1058 aaKnown RBP17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 COL13A1Q5TAT6 717 aaPredicted RBP17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 GJA10Q969M2 543 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 SENP7Q9BQF6 1050 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 RNF208Q9H0X6 261 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 TMEM60Q9H2L4 133 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 BCAS3Q9H6U6 928 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 CHMP5Q9NZZ3 219 aa17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 DDX20Q9UHI6 824 aaKnown RBP17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 GNEQ9Y223 722 aaKnown RBP17.69■□□□□ 0.42
PCDHGC3-204ENST00000617222 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 IPO5O00410 1097 aaKnown RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 NEMFO60524 1076 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 GGPS1O95749 300 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 RARBP10826 455 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 CEBPZQ03701 1054 aaKnown RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 ITGB3BPQ13352 177 aaPredicted RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 ORC2Q13416 577 aaPredicted RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 NEDD9Q14511 834 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 CALCRLQ16602 461 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 CYFIP1Q7L576 1253 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 ETNPPLQ8TBG4 499 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 HAS1Q92839 578 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 ZNF396Q96N95 335 aaPredicted RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 MLXIPQ9HAP2 919 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 KCNMB3Q9NPA1 279 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 TFIP11Q9UBB9 837 aaKnown RBP17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
PCDHGC3-204ENST00000617222 DDX39AO00148 427 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 GH1P01241 217 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 PTGDRQ13258 359 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 SF3A1Q15459 793 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 CELF3Q5SZQ8 465 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 C4orf32Q8N8J7 132 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 FAM20AQ96MK3 541 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 DEFB118Q96PH6 123 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 MTMR9Q96QG7 549 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms