RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 HOXD8P13378 290 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 TROAPQ12815 778 aa24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 MYSM1Q5VVJ2 828 aa24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 NCOA7Q8NI08 942 aa24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 ZFP91Q96JP5 570 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 ASB2Q96Q27 587 aa24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 EPOPA6NHQ4 379 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 SGSM2O43147 1006 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 GGPS1O95749 300 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 CKBP12277 381 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 UBA1P22314 1058 aaKnown RBP24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 SP2Q02086 613 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 HSDL1Q3SXM5 330 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 CELF3Q5SZQ8 465 aaKnown RBP24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 KCNV1Q6PIU1 500 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 FCHSD1Q86WN1 690 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 GPKOWQ92917 476 aaPredicted RBP eCLIP24.08■■□□□ 1.453e-6■□□□□ 9.4
TRAPPC3-208ENST00000616074 SPATA33Q96N06 139 aa24.08■■□□□ 1.45
TRAPPC3-208ENST00000616074 PNMA6FA0A0J9YX94 578 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 KIF28PB7ZC32 967 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 RBAK-RBAKDNI3L0D1 243 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 NBNO60934 754 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 CXCL10P02778 98 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 CCND2P30279 289 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 KCNJ6P48051 423 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 ANTXR2P58335 489 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 WDR5P61964 334 aaKnown RBP24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 MRPS5P82675 430 aaKnown RBP24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 TAP1Q03518 808 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 TRAF1Q13077 416 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 SART3Q15020 963 aaKnown RBP24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 WNT8BQ93098 351 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 COL4A4P53420 1690 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 PRRC2BQ5JSZ5 2229 aaKnown RBP24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 DOCK5Q9H7D0 1870 aa24.07■■□□□ 1.44
TRAPPC3-208ENST00000616074 PPFIA4O75335 1185 aa24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 IRX6P78412 446 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 ZNF200P98182 395 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 PTK7Q13308 1070 aa24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 HIC1Q14526 733 aa24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 TCTN1Q2MV58 587 aa24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 TRIM71Q2Q1W2 868 aaKnown RBP24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 CNKSR3Q6P9H4 555 aa24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 TMCO2Q7Z6W1 182 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 MTCH2Q9Y6C9 303 aa24.06■■□□□ 1.44
TRAPPC3-208ENST00000616074 TNFRSF10AO00220 468 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 PARNO95453 639 aaKnown RBP24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 TRAF7Q6Q0C0 670 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 SPRED2Q7Z698 418 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 CATIPQ7Z7H3 387 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 MB21D2Q8IYB1 491 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 IGDCC4Q8TDY8 1250 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 PIBF1Q8WXW3 757 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 ARNTL2Q8WYA1 636 aa24.05■■□□□ 1.44
TRAPPC3-208ENST00000616074 TLL1O43897 1013 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 TGFB3P10600 412 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 POU3F3P20264 500 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 DEFB103AP81534 67 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 ZNF618Q5T7W0 954 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 ADAMTS19Q8TE59 1207 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 MAP4K1Q92918 833 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 C16orf70Q9BSU1 422 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 TSPYL2Q9H2G4 693 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 BCAS3Q9H6U6 928 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 MLXIPQ9HAP2 919 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 FRMPD4Q14CM0 1322 aa24.04■■□□□ 1.44
TRAPPC3-208ENST00000616074 LCHNA4D1U4 455 aa24.03■■□□□ 1.44
TRAPPC3-208ENST00000616074 GTPBP6O43824 516 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC3-208ENST00000616074 MRPS9P82933 396 aaKnown RBP24.03■■□□□ 1.44
TRAPPC3-208ENST00000616074 KRT40Q6A162 431 aa24.03■■□□□ 1.44
TRAPPC3-208ENST00000616074 RBM8AQ9Y5S9 174 aaKnown RBP24.03■■□□□ 1.44
TRAPPC3-208ENST00000616074 TCF20Q9UGU0 1960 aaKnown RBP24.02■■□□□ 1.44
TRAPPC3-208ENST00000616074 MBTPS1Q14703 1052 aa24.02■■□□□ 1.44
TRAPPC3-208ENST00000616074 MYL10Q9BUA6 226 aa24.02■■□□□ 1.44
TRAPPC3-208ENST00000616074 LY9Q9HBG7 655 aa24.02■■□□□ 1.44
TRAPPC3-208ENST00000616074 GNPTABQ3T906 1256 aa24.01■■□□□ 1.43
TRAPPC3-208ENST00000616074 ZNF654Q8IZM8 581 aa24.01■■□□□ 1.43
TRAPPC3-208ENST00000616074 MICAL3Q7RTP6 2002 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 ABHD14A-ACY1A0A1B0GW23 586 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 LGALS2P05162 132 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 TFF2Q03403 129 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 SEMA3FQ13275 785 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 SKIV2LQ15477 1246 aaKnown RBP24■■□□□ 1.43
TRAPPC3-208ENST00000616074 SERINC5Q86VE9 423 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 IL27Q8NEV9 243 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 INPP4AQ96PE3 977 aaPredicted RBP24■■□□□ 1.43
TRAPPC3-208ENST00000616074 UHRF1Q96T88 793 aaPredicted RBP24■■□□□ 1.43
TRAPPC3-208ENST00000616074 ZBED2Q9BTP6 218 aa24■■□□□ 1.43
TRAPPC3-208ENST00000616074 C17orf102A2RUQ5 167 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 H3BRB1 525 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 STAM2O75886 525 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 DDAH1O94760 285 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 ICAM3P32942 547 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 GRB10Q13322 594 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 IKBKEQ14164 716 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 CTCFLQ8NI51 663 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 MAP3K14Q99558 947 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 SPZ1Q9BXG8 430 aa23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 TUT1Q9H6E5 874 aaKnown RBP23.99■■□□□ 1.43
TRAPPC3-208ENST00000616074 RTEL1Q9NZ71 1219 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms