RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 GBF1Q92538 1859 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 DDAH1O94760 285 aa25.08■■□□□ 1.61
CBWD1-223ENST00000613988 TGFB3P10600 412 aa25.08■■□□□ 1.61
CBWD1-223ENST00000613988 ATP2A2P16615 1042 aaKnown RBP25.08■■□□□ 1.61
CBWD1-223ENST00000613988 MCM5P33992 734 aa25.08■■□□□ 1.61
CBWD1-223ENST00000613988 PSEN2P49810 448 aa25.08■■□□□ 1.61
CBWD1-223ENST00000613988 MYSM1Q5VVJ2 828 aa25.08■■□□□ 1.61
CBWD1-223ENST00000613988 NFXL1Q6ZNB6 911 aa25.08■■□□□ 1.61
CBWD1-223ENST00000613988 IPO9Q96P70 1041 aaKnown RBP25.08■■□□□ 1.61
CBWD1-223ENST00000613988 TRIP12Q14669 1992 aaPredicted RBP25.08■■□□□ 1.6
CBWD1-223ENST00000613988 SORBS3O60504 671 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 PPFIA4O75335 1185 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 GGPS1O95749 300 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 ZNF286BP0CG31 522 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 MFSD10Q14728 455 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 CELF3Q5SZQ8 465 aaKnown RBP25.07■■□□□ 1.6
CBWD1-223ENST00000613988 TMTC2Q8N394 836 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 CAGE1Q8TC20 777 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 RRP36Q96EU6 259 aaKnown RBP25.07■■□□□ 1.6
CBWD1-223ENST00000613988 SPATA33Q96N06 139 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 COL25A1Q9BXS0 654 aaPredicted RBP25.07■■□□□ 1.6
CBWD1-223ENST00000613988 HDAC6Q9UBN7 1215 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 GTF2IRD1Q9UHL9 959 aa25.07■■□□□ 1.6
CBWD1-223ENST00000613988 CCDC69A6NI79 296 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 SLC27A2O14975 620 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 ANAPC15P60006 121 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 SP2Q02086 613 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 KIAA0753Q2KHM9 967 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 AFAP1L1Q8TED9 768 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 TMEM87BQ96K49 555 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 CTAGE1Q96RT6 745 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 LZTS2Q9BRK4 669 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 SPZ1Q9BXG8 430 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 MLXIPQ9HAP2 919 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 PCDHA11Q9Y5I1 949 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 VCANP13611 3396 aa25.06■■□□□ 1.6
CBWD1-223ENST00000613988 F2P00734 622 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 SMARCA1P28370 1054 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 HSDL1Q3SXM5 330 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 SEC63Q9UGP8 760 aaKnown RBP25.05■■□□□ 1.6
CBWD1-223ENST00000613988 HAS3O00219 553 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 SH2B2O14492 632 aaPredicted RBP25.05■■□□□ 1.6
CBWD1-223ENST00000613988 MYOGP15173 224 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 UBA1P22314 1058 aaKnown RBP25.05■■□□□ 1.6
CBWD1-223ENST00000613988 GNAQP50148 359 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 CREB3L3Q68CJ9 461 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 IL27Q8NEV9 243 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 GPKOWQ92917 476 aaPredicted RBP eCLIP25.05■■□□□ 1.6
CBWD1-223ENST00000613988 IL17RAQ96F46 866 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 TANC1Q9C0D5 1861 aa25.05■■□□□ 1.6
CBWD1-223ENST00000613988 HOXD8P13378 290 aaPredicted RBP25.04■■□□□ 1.6
CBWD1-223ENST00000613988 SELPP16109 830 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 HSPA4P34932 840 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 NECTIN1Q15223 517 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 GNPTABQ3T906 1256 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 PPP2R2DQ66LE6 453 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 SMARCC2Q8TAQ2 1214 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 PPM1EQ8WY54 764 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 CUL5Q93034 780 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 KIF2CQ99661 725 aa25.04■■□□□ 1.6
CBWD1-223ENST00000613988 STAM2O75886 525 aa25.03■■□□□ 1.6
CBWD1-223ENST00000613988 MRPS9P82933 396 aaKnown RBP25.03■■□□□ 1.6
CBWD1-223ENST00000613988 LRRC8DQ7L1W4 858 aa25.03■■□□□ 1.6
CBWD1-223ENST00000613988 USP38Q8NB14 1042 aa25.03■■□□□ 1.6
CBWD1-223ENST00000613988 PHOSPHO2Q8TCD6 241 aa25.03■■□□□ 1.6
CBWD1-223ENST00000613988 DHX38Q92620 1227 aaKnown RBP25.03■■□□□ 1.6
CBWD1-223ENST00000613988 SLC9A7Q96T83 725 aa25.03■■□□□ 1.6
CBWD1-223ENST00000613988 TET1Q8NFU7 2136 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 FRMPD4Q14CM0 1322 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 PLEKHA8P1O95397 391 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 CALM1P0DP23 149 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 CALM2P0DP24 149 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 CALM3P0DP25 149 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 RXRAP19793 462 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 IGFBP4P22692 258 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 LIFRP42702 1097 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 COL9A3Q14050 684 aaPredicted RBP25.02■■□□□ 1.6
CBWD1-223ENST00000613988 ADGRE1Q14246 886 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 USP17L6PQ6QN14 398 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 CMTR1Q8N1G2 835 aaKnown RBP25.02■■□□□ 1.6
CBWD1-223ENST00000613988 SRBD1Q8N5C6 995 aaKnown RBP25.02■■□□□ 1.6
CBWD1-223ENST00000613988 RTEL1Q9NZ71 1219 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 CHD7Q9P2D1 2997 aa25.02■■□□□ 1.6
CBWD1-223ENST00000613988 BAIAP3O94812 1187 aa25.01■■□□□ 1.59
CBWD1-223ENST00000613988 PARNO95453 639 aaKnown RBP25.01■■□□□ 1.59
CBWD1-223ENST00000613988 CKBP12277 381 aa25.01■■□□□ 1.59
CBWD1-223ENST00000613988 PTK7Q13308 1070 aa25.01■■□□□ 1.59
CBWD1-223ENST00000613988 BECN1Q14457 450 aa25.01■■□□□ 1.59
CBWD1-223ENST00000613988 RABEP1Q15276 862 aa25.01■■□□□ 1.59
CBWD1-223ENST00000613988 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
CBWD1-223ENST00000613988 SPATA31C2B4DYI2 1134 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 ICAM3P32942 547 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 ZNF200P98182 395 aaPredicted RBP25■■□□□ 1.59
CBWD1-223ENST00000613988 RBL2Q08999 1139 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 NEDD9Q14511 834 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 INPP4AQ96PE3 977 aaPredicted RBP25■■□□□ 1.59
CBWD1-223ENST00000613988 C16orf70Q9BSU1 422 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 LRRC2Q9BYS8 371 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 BCAS3Q9H6U6 928 aa25■■□□□ 1.59
CBWD1-223ENST00000613988 KIF28PB7ZC32 967 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms