RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 SPATA33Q96N06 139 aa27.25■■□□□ 1.95
TPI1-210ENST00000613953 SEC63Q9UGP8 760 aaKnown RBP27.25■■□□□ 1.95
TPI1-210ENST00000613953 PPFIA4O75335 1185 aa27.24■■□□□ 1.95
TPI1-210ENST00000613953 PLEKHA8P1O95397 391 aa27.24■■□□□ 1.95
TPI1-210ENST00000613953 MFSD10Q14728 455 aa27.24■■□□□ 1.95
TPI1-210ENST00000613953 HSDL1Q3SXM5 330 aa27.24■■□□□ 1.95
TPI1-210ENST00000613953 ZFP91Q96JP5 570 aaPredicted RBP27.24■■□□□ 1.95
TPI1-210ENST00000613953 YBX2Q9Y2T7 364 aaKnown RBP27.24■■□□□ 1.95
TPI1-210ENST00000613953 HAS3O00219 553 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 CALM1P0DP23 149 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 CALM2P0DP24 149 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 CALM3P0DP25 149 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 ACTN1P12814 892 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 KIAA0753Q2KHM9 967 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 AFAP1L1Q8TED9 768 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 GPKOWQ92917 476 aaPredicted RBP eCLIP27.23■■□□□ 1.95
TPI1-210ENST00000613953 NKX2-4Q9H2Z4 354 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 HDAC6Q9UBN7 1215 aa27.23■■□□□ 1.95
TPI1-210ENST00000613953 SORBS3O60504 671 aa27.22■■□□□ 1.95
TPI1-210ENST00000613953 STAM2O75886 525 aa27.22■■□□□ 1.95
TPI1-210ENST00000613953 ATP2A2P16615 1042 aaKnown RBP27.22■■□□□ 1.95
TPI1-210ENST00000613953 MRPS9P82933 396 aaKnown RBP27.22■■□□□ 1.95
TPI1-210ENST00000613953 GNPTABQ3T906 1256 aa27.22■■□□□ 1.95
TPI1-210ENST00000613953 SRBD1Q8N5C6 995 aaKnown RBP27.22■■□□□ 1.95
TPI1-210ENST00000613953 INPP4AQ96PE3 977 aaPredicted RBP27.22■■□□□ 1.95
TPI1-210ENST00000613953 ALG1Q9BT22 464 aa27.22■■□□□ 1.95
TPI1-210ENST00000613953 SLC28A3Q9HAS3 691 aa27.22■■□□□ 1.95
TPI1-210ENST00000613953 SPTBN5Q9NRC6 3674 aaKnown RBP27.22■■□□□ 1.95
TPI1-210ENST00000613953 SCN5AQ14524 2016 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 PIK3CDO00329 1044 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 RXRAP19793 462 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 RABGGTBP53611 331 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 RBL2Q08999 1139 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 DHX38Q92620 1227 aaKnown RBP27.21■■□□□ 1.95
TPI1-210ENST00000613953 PCDHA11Q9Y5I1 949 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 SLC12A7Q9Y666 1083 aa27.21■■□□□ 1.95
TPI1-210ENST00000613953 RNF20Q5VTR2 975 aa27.2■■□□□ 1.95
TPI1-210ENST00000613953 CMTR1Q8N1G2 835 aaKnown RBP27.2■■□□□ 1.95
TPI1-210ENST00000613953 SMARCC2Q8TAQ2 1214 aa27.2■■□□□ 1.95
TPI1-210ENST00000613953 CUL5Q93034 780 aa27.2■■□□□ 1.95
TPI1-210ENST00000613953 LRRC2Q9BYS8 371 aa27.2■■□□□ 1.95
TPI1-210ENST00000613953 FTOQ9C0B1 505 aaKnown RBP eCLIP27.2■■□□□ 1.955e-6■■■■□ 23.7
TPI1-210ENST00000613953 PRDM12Q9H4Q4 367 aa27.2■■□□□ 1.95
TPI1-210ENST00000613953 MLXIPQ9HAP2 919 aa27.2■■□□□ 1.95
TPI1-210ENST00000613953 MEIS2O14770 477 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 SELPP16109 830 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 ICAM3P32942 547 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 USP17L6PQ6QN14 398 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 SGMS1Q86VZ5 419 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 GAS2L1Q99501 681 aaPredicted RBP27.19■■□□□ 1.94
TPI1-210ENST00000613953 LRRC8DQ7L1W4 858 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 C16orf70Q9BSU1 422 aa27.19■■□□□ 1.94
TPI1-210ENST00000613953 SPATA31C2B4DYI2 1134 aa27.18■■□□□ 1.94
TPI1-210ENST00000613953 PCNX4Q63HM2 1172 aa27.18■■□□□ 1.94
TPI1-210ENST00000613953 XRRA1Q6P2D8 792 aa27.18■■□□□ 1.94
TPI1-210ENST00000613953 RAB11FIP4Q86YS3 637 aa27.18■■□□□ 1.94
TPI1-210ENST00000613953 FANCBQ8NB91 859 aa27.18■■□□□ 1.94
TPI1-210ENST00000613953 SLC9A7Q96T83 725 aa27.18■■□□□ 1.94
TPI1-210ENST00000613953 TRANK1O15050 2925 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 GBF1Q92538 1859 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 FIBPO43427 364 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 BAIAP3O94812 1187 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 CKBP12277 381 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 MYOGP15173 224 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 SEMA3FQ13275 785 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 PTK7Q13308 1070 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 PPP2R2DQ66LE6 453 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 TMTC3Q6ZXV5 915 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 BCAS3Q9H6U6 928 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 RTEL1Q9NZ71 1219 aa27.17■■□□□ 1.94
TPI1-210ENST00000613953 PARNO95453 639 aaKnown RBP27.16■■□□□ 1.94
TPI1-210ENST00000613953 NEDD9Q14511 834 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 GPNMBQ14956 572 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 METTL7BQ6UX53 244 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 MICU3Q86XE3 530 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 USP38Q8NB14 1042 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 PHOSPHO2Q8TCD6 241 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 MYH7BA7E2Y1 1941 aa27.16■■□□□ 1.94
TPI1-210ENST00000613953 NOP56O00567 594 aaKnown RBP27.15■■□□□ 1.94
TPI1-210ENST00000613953 CDC45O75419 566 aa27.15■■□□□ 1.94
TPI1-210ENST00000613953 TRIM71Q2Q1W2 868 aaKnown RBP27.15■■□□□ 1.94
TPI1-210ENST00000613953 NEK1Q96PY6 1258 aa27.15■■□□□ 1.94
TPI1-210ENST00000613953 COL25A1Q9BXS0 654 aaPredicted RBP27.15■■□□□ 1.94
TPI1-210ENST00000613953 PSTPIP2Q9H939 334 aa27.15■■□□□ 1.94
TPI1-210ENST00000613953 H3BRB1 525 aa27.14■■□□□ 1.94
TPI1-210ENST00000613953 LGALS2P05162 132 aa27.14■■□□□ 1.94
TPI1-210ENST00000613953 HIC1Q14526 733 aa27.14■■□□□ 1.94
TPI1-210ENST00000613953 CYFIP1Q7L576 1253 aa27.14■■□□□ 1.94
TPI1-210ENST00000613953 CCDC82Q8N4S0 544 aa27.14■■□□□ 1.94
TPI1-210ENST00000613953 TUT1Q9H6E5 874 aaKnown RBP27.14■■□□□ 1.94
TPI1-210ENST00000613953 hCG_1642624A0A1W2PR95 340 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 CXCL10P02778 98 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 ZNF200P98182 395 aaPredicted RBP27.13■■□□□ 1.93
TPI1-210ENST00000613953 ADGRE1Q14246 886 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 APOA5Q6Q788 366 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 SYNE3Q6ZMZ3 975 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 WNT8BQ93098 351 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 NBNO60934 754 aa27.13■■□□□ 1.93
TPI1-210ENST00000613953 EXOSC10Q01780 885 aaKnown RBP27.13■■□□□ 1.93
TPI1-210ENST00000613953 TSGA10IPQ3SY00 556 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms