RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RILPL2Q969X0 211 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 ZSCAN31Q96LW9 406 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 KIF2CQ99661 725 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 NIFKQ9BYG3 293 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 RANBP6O60518 1105 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 EFEMP2O95967 443 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 ELNP15502 786 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 TRAPPC10P48553 1259 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 MKRN3Q13064 507 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 CCDC144BQ3MJ40 725 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 TMEM67Q5HYA8 995 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 RALYLQ86SE5 291 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 LENG9Q96B70 501 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 TRIM44Q96DX7 344 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 NFIBO00712 420 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 DHX15O43143 795 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 CDKL5O76039 1030 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 FXR1P51114 621 aaKnown RBP eCLIP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 MRPS9P82933 396 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 PPP2R5CQ13362 524 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 TTBK2Q6IQ55 1244 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 TLK2Q86UE8 772 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 NLRX1Q86UT6 975 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 NCAPG2Q86XI2 1143 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 CTCFLQ8NI51 663 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 SLC9A7Q96T83 725 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 LMAN2LQ9H0V9 348 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 ELAC1Q9H777 363 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 SH2B1Q9NRF2 756 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 MAFBQ9Y5Q3 323 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 STBD1O95210 358 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 MCCP23508 829 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 MRE11P49959 708 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 FSCN1Q16658 493 aaKnown RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 CLEC10AQ8IUN9 316 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 RASEFQ8IZ41 740 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 WASF1Q92558 559 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 GPR20Q99678 358 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 MXRA8Q9BRK3 442 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 KCNMB3Q9NPA1 279 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 RRN3P2A6NIE6 340 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 DEXIO95424 95 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 PDIA3P30101 505 aaKnown RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 BAATQ14032 418 aaPredicted RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 HYIQ5T013 277 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 SAMD1Q6SPF0 538 aaPredicted RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 TBC1D32Q96NH3 1257 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 TSPAN18Q96SJ8 248 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 SPC25Q9HBM1 224 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 ISY1Q9ULR0 285 aaKnown RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 TAF6LQ9Y6J9 622 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 IFIT3O14879 490 aaKnown RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 APPP05067 770 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 SCG2P13521 617 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 CALML3P27482 149 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 TDHQ8IZJ6 230 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 CUL5Q93034 780 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 DEFB118Q96PH6 123 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
CBWD1-219ENST00000611457 TBC1D22BQ9NU19 505 aa8.23□□□□□ -1.09
CBWD1-219ENST00000611457 NUP210Q8TEM1 1887 aaPredicted RBP8.22□□□□□ -1.09
CBWD1-219ENST00000611457 NR3C2P08235 984 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 SFNP31947 248 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 CUL4AQ13619 759 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 TARBP2Q15633 366 aaKnown RBP8.22□□□□□ -1.09
CBWD1-219ENST00000611457 GNPTABQ3T906 1256 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 AGO4Q9HCK5 861 aaKnown RBP8.22□□□□□ -1.09
CBWD1-219ENST00000611457 ZBTB43O43298 467 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 CYP2B6P20813 491 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 WWC2Q6AWC2 1192 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 CNNM4Q6P4Q7 775 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 KCTD1Q719H9 257 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 UPF2Q9HAU5 1272 aaKnown RBP8.22□□□□□ -1.09
CBWD1-219ENST00000611457 STXBP5LQ9Y2K9 1186 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 PCDHA2Q9Y5H9 948 aa8.22□□□□□ -1.09
CBWD1-219ENST00000611457 SMIM35A0A1B0GVV1 85 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 TRIM43BA6NCK2 446 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 CCDC85CA6NKD9 419 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 ESPNB1AK53 854 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 LAD1O00515 517 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 TFRCP02786 760 aaKnown RBP8.21□□□□□ -1.09
CBWD1-219ENST00000611457 GNA11P29992 359 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 DDIT3P35638 169 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 PRPHP41219 470 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 KCNA10Q16322 511 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 DGKDQ16760 1214 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 RTN1Q16799 776 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 BRDTQ58F21 947 aaPredicted RBP8.21□□□□□ -1.09
CBWD1-219ENST00000611457 ZNF484Q5JVG2 852 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 ODR4Q5SWX8 454 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 ABHD15Q6UXT9 468 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 ANKRD35Q8N283 1001 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 ETNPPLQ8TBG4 499 aa8.21□□□□□ -1.09
CBWD1-219ENST00000611457 NRCAMQ92823 1304 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms