RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 GRK4P32298 578 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ADCYAP1R1P41586 468 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 TRAPPC10P48553 1259 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 CEBPZQ03701 1054 aaKnown RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 DNM1Q05193 864 aaKnown RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 CACNB2Q08289 660 aaPredicted RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 ACVR2BQ13705 512 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ZNF174Q15697 407 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 GJC2Q5T442 439 aaPredicted RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 MFSD14CQ5VZR4 134 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 PPP4R3AQ6IN85 833 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 TAPT1Q6NXT6 567 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 MOXD1Q6UVY6 613 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 SEPT14Q6ZU15 432 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 PLA2G4DQ86XP0 818 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 GJA10Q969M2 543 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 MBOAT7Q96N66 472 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 USP28Q96RU2 1077 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ABHD16BQ9H3Z7 469 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 VTA1Q9NP79 307 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 JADE2Q9NQC1 790 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 CNPY2Q9Y2B0 182 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 CLIC4Q9Y696 253 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 SPATA31C2B4DYI2 1134 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 MSH4O15457 936 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 FIBPO43427 364 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 ATP9AO75110 1047 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 ZNF865P0CJ78 1059 aaPredicted RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 UBA1P22314 1058 aaKnown RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 SETQ01105 290 aaPredicted RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 SP2Q02086 613 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 ITGB3BPQ13352 177 aaPredicted RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 LY6KQ17RY6 165 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 GNPTABQ3T906 1256 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 SLC9C1Q4G0N8 1177 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 Q4G0T1 1027 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 FBXO46Q6PJ61 603 aaPredicted RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 NIPA1Q7RTP0 329 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 NLRX1Q86UT6 975 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 ETNPPLQ8TBG4 499 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 GPRASP2Q96D09 838 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 NAP1L4Q99733 375 aaKnown RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 TMEM60Q9H2L4 133 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 BCAS3Q9H6U6 928 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 AGO4Q9HCK5 861 aaKnown RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 PRDM10Q9NQV6 1147 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
MSH6-211ENST00000606499 KCNH7Q9NS40 1196 aa8.71□□□□□ -1.02
MSH6-211ENST00000606499 RBM47A0AV96 593 aaKnown RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 IPO5O00410 1097 aaKnown RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 MYCP01106 439 aaPredicted RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 TXNP10599 105 aaKnown RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 KCNA2P16389 499 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 NCLP19338 710 aaKnown RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 CNGA1P29973 690 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 ICAM3P32942 547 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 PTGDRQ13258 359 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 ORC2Q13416 577 aaPredicted RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 CALCRLQ16602 461 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 ANO1Q5XXA6 986 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 CCDC62Q6P9F0 684 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 C4orf32Q8N8J7 132 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 SCFD2Q8WU76 684 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 HAS1Q92839 578 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 COPS5Q92905 334 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 SLC5A5Q92911 643 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 ZNF396Q96N95 335 aaPredicted RBP8.7□□□□□ -1.02
MSH6-211ENST00000606499 ZNF577Q9BSK1 485 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 KCNMB3Q9NPA1 279 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 TELO2Q9Y4R8 837 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 ATP6V1DQ9Y5K8 247 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 WDR81Q562E7 1941 aa8.7□□□□□ -1.02
MSH6-211ENST00000606499 DDX39AO00148 427 aaKnown RBP8.69□□□□□ -1.02
MSH6-211ENST00000606499 GGPS1O95749 300 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 OR52Z1P0C646 297 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 SMPD1P17405 629 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 TXKP42681 527 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 NASPP49321 788 aaPredicted RBP8.69□□□□□ -1.02
MSH6-211ENST00000606499 KRT85P78386 507 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
MSH6-211ENST00000606499 ATP2C1P98194 919 aaPredicted RBP8.69□□□□□ -1.02
MSH6-211ENST00000606499 SP4Q02446 784 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 TNFAIP2Q03169 654 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 ARHGAP1Q07960 439 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 TTLL4Q14679 1199 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 PTPAQ15257 358 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 LRCH2Q5VUJ6 765 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 CDHR1Q96JP9 859 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 MTMR9Q96QG7 549 aa8.69□□□□□ -1.02
MSH6-211ENST00000606499 GDPD2Q9HCC8 539 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms