RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HOXD8P13378 290 aaPredicted RBP19.58■□□□□ 0.72
USE1-208ENST00000600970 MKRN4PQ13434 485 aaPredicted RBP19.58■□□□□ 0.72
USE1-208ENST00000600970 PTCRAQ6ISU1 281 aaPredicted RBP19.58■□□□□ 0.72
USE1-208ENST00000600970 FBXO11Q86XK2 927 aa19.58■□□□□ 0.72
USE1-208ENST00000600970 TICAM2Q86XR7 235 aa19.58■□□□□ 0.72
USE1-208ENST00000600970 DBF4BQ8NFT6 615 aa19.58■□□□□ 0.72
USE1-208ENST00000600970 AMHP03971 560 aa19.57■□□□□ 0.72
USE1-208ENST00000600970 HTRA4P83105 476 aaPredicted RBP19.57■□□□□ 0.72
USE1-208ENST00000600970 MYOCDQ8IZQ8 938 aa19.57■□□□□ 0.72
USE1-208ENST00000600970 SP7Q8TDD2 431 aaPredicted RBP19.57■□□□□ 0.72
USE1-208ENST00000600970 MRPL38Q96DV4 380 aaKnown RBP19.57■□□□□ 0.72
USE1-208ENST00000600970 KAT14Q9H8E8 782 aa19.57■□□□□ 0.72
USE1-208ENST00000600970 NLRC5Q86WI3 1866 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 EMSYQ7Z589 1322 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 BRWD1Q9NSI6 2320 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 GRXCR2A6NFK2 248 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 PPFIA4O75335 1185 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 RGS20O76081 388 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 CFBP00751 764 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 SSTR3P32745 418 aaPredicted RBP19.56■□□□□ 0.72
USE1-208ENST00000600970 HSDL1Q3SXM5 330 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 ASPRV1Q53RT3 343 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 MYSM1Q5VVJ2 828 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 ANKS1AQ92625 1134 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 JMJD4Q9H9V9 463 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 VAT1LQ9HCJ6 419 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 CTNNA3Q9UI47 895 aa19.56■□□□□ 0.72
USE1-208ENST00000600970 RSPH10B2B2RC85 870 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 ZNF213O14771 459 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 OPLAHO14841 1288 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
USE1-208ENST00000600970 SORBS3O60504 671 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 KDM4AO75164 1064 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 RSPH10BP0C881 870 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 THPOP40225 353 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 HSD17B4P51659 736 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 EPC2Q52LR7 807 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 PLEKHG4Q58EX7 1191 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 CCDC178Q5BJE1 867 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 CELF3Q5SZQ8 465 aaKnown RBP19.55■□□□□ 0.72
USE1-208ENST00000600970 ALYREFQ86V81 257 aaKnown RBP19.55■□□□□ 0.72
USE1-208ENST00000600970 SERINC5Q86VE9 423 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 NEK9Q8TD19 979 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 PDCD2LQ9BRP1 358 aa19.55■□□□□ 0.72
USE1-208ENST00000600970 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
USE1-208ENST00000600970 PTPROQ16827 1216 aa19.54■□□□□ 0.72
USE1-208ENST00000600970 PUS10Q3MIT2 529 aaKnown RBP19.54■□□□□ 0.72
USE1-208ENST00000600970 SPATA33Q96N06 139 aa19.54■□□□□ 0.72
USE1-208ENST00000600970 SAMD11Q96NU1 681 aa19.54■□□□□ 0.72
USE1-208ENST00000600970 C16orf70Q9BSU1 422 aa19.54■□□□□ 0.72
USE1-208ENST00000600970 TRIM6-TRIM34B2RNG4 842 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 B4E1Z4 1266 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 H3BQ06 376 aaPredicted RBP19.53■□□□□ 0.72
USE1-208ENST00000600970 GGPS1O95749 300 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
USE1-208ENST00000600970 ALADP13716 330 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 NT5C2P49902 561 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
USE1-208ENST00000600970 SP2Q02086 613 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 GHRHRQ02643 423 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 KCNV1Q6PIU1 500 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 ENAHQ8N8S7 591 aaPredicted RBP19.53■□□□□ 0.72
USE1-208ENST00000600970 RILPL2Q969X0 211 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 ZSCAN10Q96SZ4 725 aaPredicted RBP19.53■□□□□ 0.72
USE1-208ENST00000600970 RALGAPA2Q2PPJ7 1873 aa19.53■□□□□ 0.72
USE1-208ENST00000600970 COL4A6Q14031 1691 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 H3BNC9 293 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 GPM6BQ13491 265 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 TIGD5Q53EQ6 642 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 STOX1Q6ZVD7 989 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 BANK1Q8NDB2 785 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 ATP6V0A1Q93050 837 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 TOP1MTQ969P6 601 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 UIMC1Q96RL1 719 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 AMNQ9BXJ7 453 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.72
USE1-208ENST00000600970 ATG2AQ2TAZ0 1938 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 C17orf102A2RUQ5 167 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 SDSP20132 328 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 UBA1P22314 1058 aaKnown RBP19.51■□□□□ 0.71
USE1-208ENST00000600970 HOXC8P31273 242 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 PGM5Q15124 567 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 TCEAL5Q5H9L2 206 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 VSIG10LQ86VR7 867 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 IL31RAQ8NI17 732 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 SEPT8Q92599 483 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 PABPC5Q96DU9 382 aaKnown RBP19.51■□□□□ 0.71
USE1-208ENST00000600970 YME1L1Q96TA2 773 aa19.51■□□□□ 0.71
USE1-208ENST00000600970 MAP3K20Q9NYL2 800 aaKnown RBP19.51■□□□□ 0.71
USE1-208ENST00000600970 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.5■□□□□ 0.71
USE1-208ENST00000600970 H3BRB1 525 aa19.5■□□□□ 0.71
USE1-208ENST00000600970 TREHO43280 583 aa19.5■□□□□ 0.71
USE1-208ENST00000600970 PPP1R11O60927 126 aaPredicted RBP19.5■□□□□ 0.71
USE1-208ENST00000600970 UPP2O95045 317 aa19.5■□□□□ 0.71
USE1-208ENST00000600970 CSPP1Q1MSJ5 1256 aa19.5■□□□□ 0.71
USE1-208ENST00000600970 TMEM192Q8IY95 271 aa19.5■□□□□ 0.71
USE1-208ENST00000600970 GPKOWQ92917 476 aaPredicted RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms