RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
ZNF548-211ENST00000600927 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 PPP1R11O60927 126 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 AKR1A1P14550 325 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 LIG1P18858 919 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 MRPL12P52815 198 aaKnown RBP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 SNW1Q13573 536 aaKnown RBP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 SLC30A10Q6XR72 485 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 NECAB2Q7Z6G3 386 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 FMR1NBQ8N0W7 255 aaPredicted RBP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.32
ZNF548-211ENST00000600927 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 HPSEQ9Y251 543 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 ABCB11O95342 1321 aa13.08□□□□□ -0.32
ZNF548-211ENST00000600927 SYCE3A1L190 88 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 DNM1LO00429 736 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 OPLAHO14841 1288 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 ADCY6O43306 1168 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 KINO60870 393 aaKnown RBP13.07□□□□□ -0.32
ZNF548-211ENST00000600927 NR1I2O75469 434 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 EDNRBP24530 442 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 CNGA1P29973 690 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
ZNF548-211ENST00000600927 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
ZNF548-211ENST00000600927 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 RESP18Q5W5W9 173 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 TYW1BQ6NUM6 668 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 FSIP1Q8NA03 581 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
ZNF548-211ENST00000600927 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
ZNF548-211ENST00000600927 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
ZNF548-211ENST00000600927 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 ABHD16BQ9H3Z7 469 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 VAT1LQ9HCJ6 419 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
ZNF548-211ENST00000600927 DNAH12Q6ZR08 3092 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 ASB14A6NK59 587 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 ADAMTS4O75173 837 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 CCDC192P0DO97 292 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 PRPHP41219 470 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 RPS6P62753 249 aaKnown RBP13.06□□□□□ -0.32
ZNF548-211ENST00000600927 NKX3-2P78367 333 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
ZNF548-211ENST00000600927 UVSSAQ2YD98 709 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 USH1GQ495M9 461 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 AMNQ9BXJ7 453 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 GRPEL1Q9HAV7 217 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 USP25Q9UHP3 1055 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 FBXO2Q9UK22 296 aaPredicted RBP13.06□□□□□ -0.32
ZNF548-211ENST00000600927 MCM3APO60318 1980 aa13.06□□□□□ -0.32
ZNF548-211ENST00000600927 RANBP2P49792 3224 aaKnown RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 ZNF202O95125 648 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 ALDH5A1P51649 535 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 ADCY7P51828 1080 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 LRRC41Q15345 812 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 REXO1Q8N1G1 1221 aaKnown RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 SAMD3Q8N6K7 520 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 DNERQ8NFT8 737 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 CUL5Q93034 780 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 LENG1Q96BZ8 264 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 UPF3AQ9H1J1 476 aaKnown RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 XPNPEP3Q9NQH7 507 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-211ENST00000600927 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
ZNF548-211ENST00000600927 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
ZNF548-211ENST00000600927 FOSP01100 380 aaPredicted RBP13.04□□□□□ -0.32
ZNF548-211ENST00000600927 RARBP10826 455 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 CST5P28325 142 aaPredicted RBP13.04□□□□□ -0.32
ZNF548-211ENST00000600927 SYKP43405 635 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
ZNF548-211ENST00000600927 CCSAPQ6IQ19 270 aaPredicted RBP13.04□□□□□ -0.32
ZNF548-211ENST00000600927 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 SHC4Q6S5L8 630 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
ZNF548-211ENST00000600927 ARRDC4Q8NCT1 418 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms