RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 JPH2Q9BR39 696 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 TAF1DQ9H5J8 278 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 ACTR5Q9H9F9 607 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 KLC4Q9NSK0 619 aa20.55■□□□□ 0.88
ARHGEF1-221ENST00000600387 ABCA3Q99758 1704 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 CES2O00748 559 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 MYBP10242 640 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 CYP2D6P10635 497 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 TECP42680 631 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 ORC2Q13416 577 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 LETM2Q2VYF4 491 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 CCDC13Q8IYE1 715 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 TSG101Q99816 390 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 MMTAG2Q9BU76 263 aaKnown RBP20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 ZMYND12Q9H0C1 365 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 ATAD5Q96QE3 1844 aa20.54■□□□□ 0.88
ARHGEF1-221ENST00000600387 RASSF9O75901 435 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 TFAP4Q01664 338 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 IFT88Q13099 833 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 LRRC55Q6ZSA7 311 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 ISCUQ9H1K1 167 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 RIC8AQ9NPQ8 531 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 NEK8Q86SG6 692 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 PROM2Q8N271 834 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 USP38Q8NB14 1042 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 IL17RBQ9NRM6 502 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 MAST2Q6P0Q8 1798 aa20.53■□□□□ 0.88
ARHGEF1-221ENST00000600387 GOLGA6L7A0A1B0GV03 622 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 RAD51CO43502 376 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 NTSR2O95665 410 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 FTCDO95954 541 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 MYZAPP0CAP1 466 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 MECOMQ03112 1051 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 KCNMA1Q12791 1236 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 PSMD2Q13200 908 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 CUL1Q13616 776 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 LRRC45Q96CN5 670 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 CYFIP2Q96F07 1278 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 LZTS2Q9BRK4 669 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 TANGO6Q9C0B7 1094 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 TMEM59LQ9UK28 342 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 MYMKA6NI61 221 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 CYTH3O43739 400 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 SLC18A3Q16572 532 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 CCDC121Q6ZUS5 278 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 ZKSCAN4Q969J2 545 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 FAM84BQ96KN1 310 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 POLD4Q9HCU8 107 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
ARHGEF1-221ENST00000600387 GMNCA6NCL1 334 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 KLRC1P26715 233 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 CDR1P51861 262 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 ATP2B2Q01814 1243 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 BIRC3Q13489 604 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 RUFY4Q6ZNE9 571 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 GPIHBP1Q8IV16 184 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 TAF4BQ92750 862 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 BLOC1S4Q9NUP1 217 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 COL4A1P02462 1669 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 GNA11P29992 359 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 SLC35G1Q2M3R5 365 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 FAM83BQ5T0W9 1011 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 LARP4BQ92615 738 aaKnown RBP20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 LRRC27Q9C0I9 530 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 NLRC4Q9NPP4 1024 aa20.51■□□□□ 0.87
ARHGEF1-221ENST00000600387 TLR2O60603 784 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 HPDP32754 393 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 DNA2P51530 1060 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 NAPAP54920 295 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 EHHADHQ08426 723 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 GRB10Q13322 594 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 C6orf50Q9HD87 102 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 PPANQ9NQ55 473 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 PALM3A6NDB9 673 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 HSD17B3P37058 310 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 MMP14P50281 582 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 NEDD9Q14511 834 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 HLTFQ14527 1009 aaKnown RBP eCLIP20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 SLC40A1Q9NP59 571 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 MCM9Q9NXL9 1143 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 COL4A3BPQ9Y5P4 624 aa20.5■□□□□ 0.87
ARHGEF1-221ENST00000600387 BTNL10A8MVZ5 291 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 NOL4O94818 638 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 TRADDQ15628 312 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 ARMC9Q7Z3E5 817 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 CCDC50Q8IVM0 306 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 GIMAP7Q8NHV1 300 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 TBC1D5Q92609 795 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 CDK5RAP3Q96JB5 506 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 CD248Q9HCU0 757 aa20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 BSDC1Q9NW68 430 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF1-221ENST00000600387 H0YGN5 161 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 TRAPPC3O43617 180 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 C21orf2O43822 256 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 FKBP3Q00688 224 aaKnown RBP20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 KIAA0753Q2KHM9 967 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 PREPLQ4J6C6 727 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 DYMQ7RTS9 669 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms