RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NASPP49321 788 aaPredicted RBP13.92□□□□□ -0.18
TGFB1-204ENST00000600196 DUSP28Q4G0W2 176 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 PLA2G4DQ86XP0 818 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 RDM1Q8NG50 284 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 IL31RAQ8NI17 732 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 LENG9Q96B70 501 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 ARMC5Q96C12 935 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 PURBQ96QR8 312 aaKnown RBP13.92□□□□□ -0.18
TGFB1-204ENST00000600196 WDR11Q9BZH6 1224 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 KCNMB3Q9NPA1 279 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 FLRT1Q9NZU1 646 aa13.92□□□□□ -0.18
TGFB1-204ENST00000600196 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
TGFB1-204ENST00000600196 PPP6R2O75170 966 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 DUSP11O75319 330 aaKnown RBP13.91□□□□□ -0.18
TGFB1-204ENST00000600196 FOSBP53539 338 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 KRT85P78386 507 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 LAMC2Q13753 1193 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 SLC39A14Q15043 492 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 CCL14Q16627 93 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 PRR16Q569H4 304 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 ANO1Q5XXA6 986 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 SLC5A5Q92911 643 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 AGO4Q9HCK5 861 aaKnown RBP13.91□□□□□ -0.18
TGFB1-204ENST00000600196 HMX1Q9NP08 348 aaPredicted RBP13.91□□□□□ -0.18
TGFB1-204ENST00000600196 PTCH2Q9Y6C5 1203 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 MRVI1Q9Y6F6 885 aa13.91□□□□□ -0.18
TGFB1-204ENST00000600196 LCTP09848 1927 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 IPO5O00410 1097 aaKnown RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 KPNA6O60684 536 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 TXNP10599 105 aaKnown RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 SFNP31947 248 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 CYP2C19P33261 490 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 ATP2C1P98194 919 aaPredicted RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 KRT76Q01546 638 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 TNFAIP2Q03169 654 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 CACNB2Q08289 660 aaPredicted RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 PKP1Q13835 747 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 SLC9C1Q4G0N8 1177 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 SMAP1Q8IYB5 467 aaPredicted RBP13.9□□□□□ -0.18
TGFB1-204ENST00000600196 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 ETNPPLQ8TBG4 499 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 KCNG4Q8TDN1 519 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 SDF4Q9BRK5 362 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 ZNF577Q9BSK1 485 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 TCEAL9Q9UHQ7 104 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 RCOR1Q9UKL0 485 aa13.9□□□□□ -0.18
TGFB1-204ENST00000600196 MSH4O15457 936 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 MARCH6O60337 910 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 PSMD10O75832 226 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 TDP2O95551 362 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 GH1P01241 217 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 INHAP05111 366 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 OR52Z1P0C646 297 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 KCNA2P16389 499 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 MUTP22033 750 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 PTGDRQ13258 359 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 CALCRLQ16602 461 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
TGFB1-204ENST00000600196 ZNF746Q6NUN9 644 aaPredicted RBP13.89□□□□□ -0.19
TGFB1-204ENST00000600196 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
TGFB1-204ENST00000600196 AK8Q96MA6 479 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 SEZ6LQ9BYH1 1024 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 SPC25Q9HBM1 224 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 GNEQ9Y223 722 aaKnown RBP13.89□□□□□ -0.19
TGFB1-204ENST00000600196 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 MYH7BA7E2Y1 1941 aa13.89□□□□□ -0.19
TGFB1-204ENST00000600196 FAM205CA6NFA0 338 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 DHX15O43143 795 aaKnown RBP13.88□□□□□ -0.19
TGFB1-204ENST00000600196 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
TGFB1-204ENST00000600196 PPFIA4O75335 1185 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 ARP10275 920 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 MCM7P33993 719 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.197e-8■□□□□ 8.9
TGFB1-204ENST00000600196 SEMA3FQ13275 785 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 PPP2R5CQ13362 524 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 PTPAQ15257 358 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
TGFB1-204ENST00000600196 ZNF174Q15697 407 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 B3GNT9Q6UX72 402 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 DHX37Q8IY37 1157 aaKnown RBP13.88□□□□□ -0.19
TGFB1-204ENST00000600196 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 CYP2W1Q8TAV3 490 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 NEK9Q8TD19 979 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 HAS1Q92839 578 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 TEKT3Q9BXF9 490 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms