RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TNFRSF10AO00220 468 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 MYCLP12524 364 aaPredicted RBP17.06■□□□□ 0.32
IRF3-223ENST00000599223 SELPP16109 830 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
IRF3-223ENST00000599223 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
IRF3-223ENST00000599223 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
IRF3-223ENST00000599223 MBTPS1Q14703 1052 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 MFSD10Q14728 455 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 TRIM71Q2Q1W2 868 aaKnown RBP17.06■□□□□ 0.32
IRF3-223ENST00000599223 NECAB3Q96P71 396 aaPredicted RBP17.06■□□□□ 0.32
IRF3-223ENST00000599223 PIGSQ96S52 555 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 PCDHA1Q9Y5I3 950 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 MTCH2Q9Y6C9 303 aa17.06■□□□□ 0.32
IRF3-223ENST00000599223 BAIAP3O94812 1187 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 CKBP12277 381 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 UBA1P22314 1058 aaKnown RBP17.05■□□□□ 0.32
IRF3-223ENST00000599223 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
IRF3-223ENST00000599223 SP2Q02086 613 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 PGM5Q15124 567 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 KIAA0753Q2KHM9 967 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 PHOSPHO2Q8TCD6 241 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
IRF3-223ENST00000599223 GGPS1O95749 300 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 CXCL10P02778 98 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 CHMLP26374 656 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 ANTXR2P58335 489 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 LAMC2Q13753 1193 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 DHX37Q8IY37 1157 aaKnown RBP17.04■□□□□ 0.32
IRF3-223ENST00000599223 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 BCAS3Q9H6U6 928 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
IRF3-223ENST00000599223 FRMPD4Q14CM0 1322 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 LPXNO60711 386 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 POU3F3P20264 500 aaPredicted RBP17.03■□□□□ 0.32
IRF3-223ENST00000599223 KCNQ1P51787 676 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 TROAPQ12815 778 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 COL9A3Q14050 684 aaPredicted RBP17.03■□□□□ 0.32
IRF3-223ENST00000599223 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
IRF3-223ENST00000599223 VSIG10LQ86VR7 867 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 UHRF1Q96T88 793 aaPredicted RBP17.03■□□□□ 0.32
IRF3-223ENST00000599223 C16orf70Q9BSU1 422 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 KATNAL1Q9BW62 490 aa17.03■□□□□ 0.32
IRF3-223ENST00000599223 E7EWF7 191 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 IFIT3O14879 490 aaKnown RBP17.02■□□□□ 0.32
IRF3-223ENST00000599223 TLL1O43897 1013 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 KCNJ6P48051 423 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 GRB10Q13322 594 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 CNKSR3Q6P9H4 555 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 TELO2Q9Y4R8 837 aa17.02■□□□□ 0.32
IRF3-223ENST00000599223 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
IRF3-223ENST00000599223 TRDNQ13061 729 aa17.01■□□□□ 0.31
IRF3-223ENST00000599223 SEMA3FQ13275 785 aa17.01■□□□□ 0.31
IRF3-223ENST00000599223 PTK7Q13308 1070 aa17.01■□□□□ 0.31
IRF3-223ENST00000599223 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
IRF3-223ENST00000599223 MB21D2Q8IYB1 491 aaPredicted RBP17.01■□□□□ 0.31
IRF3-223ENST00000599223 GDPD5Q8WTR4 605 aa17.01■□□□□ 0.31
IRF3-223ENST00000599223 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
IRF3-223ENST00000599223 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
IRF3-223ENST00000599223 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
IRF3-223ENST00000599223 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
IRF3-223ENST00000599223 SGSM2O43147 1006 aa17■□□□□ 0.31
IRF3-223ENST00000599223 POLR2MP0CAP2 368 aa17■□□□□ 0.31
IRF3-223ENST00000599223 BMP1P13497 986 aa17■□□□□ 0.31
IRF3-223ENST00000599223 CCND2P30279 289 aa17■□□□□ 0.31
IRF3-223ENST00000599223 HOXC8P31273 242 aa17■□□□□ 0.31
IRF3-223ENST00000599223 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
IRF3-223ENST00000599223 WTAPQ15007 396 aa17■□□□□ 0.31
IRF3-223ENST00000599223 SKIV2LQ15477 1246 aaKnown RBP17■□□□□ 0.31
IRF3-223ENST00000599223 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
IRF3-223ENST00000599223 SERINC5Q86VE9 423 aa17■□□□□ 0.31
IRF3-223ENST00000599223 OSBPL7Q9BZF2 842 aa17■□□□□ 0.31
IRF3-223ENST00000599223 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
IRF3-223ENST00000599223 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
IRF3-223ENST00000599223 PNMA6FA0A0J9YX94 578 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 KIF28PB7ZC32 967 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
IRF3-223ENST00000599223 PPFIA4O75335 1185 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 GJB5O95377 273 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 LGALS2P05162 132 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 TRIM50Q86XT4 487 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 NCOA7Q8NI08 942 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 IGDCC4Q8TDY8 1250 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 RAPGEFL1Q9UHV5 662 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 MTUS1Q9ULD2 1270 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 NLRC5Q86WI3 1866 aa16.99■□□□□ 0.31
IRF3-223ENST00000599223 ABHD14A-ACY1A0A1B0GW23 586 aa16.98■□□□□ 0.31
IRF3-223ENST00000599223 FAM117BQ6P1L5 589 aa16.98■□□□□ 0.31
IRF3-223ENST00000599223 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
IRF3-223ENST00000599223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.98■□□□□ 0.31
IRF3-223ENST00000599223 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
IRF3-223ENST00000599223 RUFY2Q8WXA3 655 aa16.98■□□□□ 0.31
IRF3-223ENST00000599223 INPP4AQ96PE3 977 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms