RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 TRIM58Q8NG06 486 aa17.14■□□□□ 0.33
TRPM4-209ENST00000598502 MYCBPAPQ8TBZ2 947 aa17.14■□□□□ 0.33
TRPM4-209ENST00000598502 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
TRPM4-209ENST00000598502 FAM153AQ9UHL3 310 aa17.14■□□□□ 0.33
TRPM4-209ENST00000598502 CAPN6Q9Y6Q1 641 aa17.14■□□□□ 0.33
TRPM4-209ENST00000598502 FGRP09769 529 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 PBX1P40424 430 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRPM4-209ENST00000598502 NOC4LQ9BVI4 516 aaKnown RBP17.13■□□□□ 0.33
TRPM4-209ENST00000598502 FRMPD2Q68DX3 1309 aaPredicted RBP17.13■□□□□ 0.33
TRPM4-209ENST00000598502 DUOX1Q9NRD9 1551 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 GCFC2P16383 781 aaKnown RBP17.13■□□□□ 0.33
TRPM4-209ENST00000598502 IFFO1Q0D2I5 559 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 MYO1EQ12965 1108 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
TRPM4-209ENST00000598502 RBM12Q9NTZ6 932 aaKnown RBP17.13■□□□□ 0.33
TRPM4-209ENST00000598502 PCDHA4Q9UN74 947 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
TRPM4-209ENST00000598502 PSMA7O14818 248 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 OPLAHO14841 1288 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 CYTH3O43739 400 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 LDHCP07864 332 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 PTGISQ16647 500 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
TRPM4-209ENST00000598502 CYB5D1Q6P9G0 228 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 EMBQ6PCB8 327 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 MTRQ99707 1265 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 TLDC2A0PJX2 215 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 GSTO1P78417 241 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 PAK2Q13177 524 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 CACNA2D3Q8IZS8 1091 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 OSBPL9Q96SU4 736 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 SNX12Q9UMY4 172 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 HYOU1Q9Y4L1 999 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 FSBPO95073 299 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 RASSF7Q02833 373 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 CD209Q9NNX6 404 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 TIAM2Q8IVF5 1701 aa17.12■□□□□ 0.33
TRPM4-209ENST00000598502 ENO4A6NNW6 628 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 A6NNZ2 444 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 KIF4AO95239 1232 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 MYZAPP0CAP1 466 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 GTF2IP78347 998 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 TUBB8Q3ZCM7 444 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 PLAAQ9Y263 795 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 MDH1P40925 334 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 CDK8P49336 464 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 SMTNP53814 917 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 SLC35G1Q2M3R5 365 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 TMC4Q7Z404 712 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 SPDL1Q96EA4 605 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 SH3GL2Q99962 352 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 PACSIN2Q9UNF0 486 aaPredicted RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 FTCDO95954 541 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 RASA1P20936 1047 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 LRRC47Q8N1G4 583 aaKnown RBP17.11■□□□□ 0.33
TRPM4-209ENST00000598502 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 BCORQ6W2J9 1755 aa17.11■□□□□ 0.33
TRPM4-209ENST00000598502 FNTAP49354 379 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SOGA3Q5TF21 947 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 ARFGAP2Q8N6H7 521 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
TRPM4-209ENST00000598502 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 MCM8Q9UJA3 840 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SERPINB2P05120 415 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SLURP2P0DP57 97 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 CTNNA1P35221 906 aaKnown RBP17.1■□□□□ 0.33
TRPM4-209ENST00000598502 GNAQP50148 359 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
TRPM4-209ENST00000598502 TPX2Q9ULW0 747 aaKnown RBP17.1■□□□□ 0.33
TRPM4-209ENST00000598502 PCDHA6Q9UN73 950 aa17.1■□□□□ 0.33
TRPM4-209ENST00000598502 PCDHA8Q9Y5H6 950 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms